| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1910 |
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| Symbol | |
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| ID | 5052791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 1990563 |
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| End bp | 1991135 |
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| Gene Length | 573 bp |
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| Protein Length | 190 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640472084 |
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| Product | OstA family protein |
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| Protein accession | YP_001156686 |
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| Protein GI | 145590089 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1934] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03002] lipopolysaccharide transport periplasmic protein LptA |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTGAGCA TGTTTGAACC TCTTCATTTT TCTAAATCAG CGTGCCTATT AGTGCTCTTA
GCAGCATTTA CTGGCTTGGC AAAAGCTGAA AAAGCAGATC AAGATAAGCC AATTATTCTC
GAGGCAGAAA AGGTGTCGGT CAATGATGTT CAGCAAAGCT ACGATCTGAA TGGGCAGGTT
CTGCTTATTA AGGGAAGCAT GATTGTGACA GGCGAAGATG GTCATATTCA AGTCGACCCT
GAAGGCTATG AGTTTGTTGA AGTCAAAGGC ACCTCCGATA CAGTCGCTAG CTTCAGACAA
CGTAGGGAAG GGCCTGCTGA TGAATTTATG CAAGGGCGTG GCACACAAGT AACCTATAAC
GCTAAGACTG AACAGTTGAC TATTACCGGC GATGCTTCCC TGCGCCGTTC TCTGAATATG
CAAATGCTCG ATCAATTGCA AGGAACAAAG ATTGAGTACG ACGACATTAC GGAACGCTAT
CGAGTAACAC CTCCTGCAGA TGCAAAGCCA GAGGACCTGC CTTTAGCAAG AGCAATCCTT
TCACCAAGGC GGAAAGCTAC ACTAGACAAA TGA
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| Protein sequence | MLSMFEPLHF SKSACLLVLL AAFTGLAKAE KADQDKPIIL EAEKVSVNDV QQSYDLNGQV
LLIKGSMIVT GEDGHIQVDP EGYEFVEVKG TSDTVASFRQ RREGPADEFM QGRGTQVTYN
AKTEQLTITG DASLRRSLNM QMLDQLQGTK IEYDDITERY RVTPPADAKP EDLPLARAIL
SPRRKATLDK
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