Gene Pnuc_1909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1909 
Symbol 
ID5052753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp1989920 
End bp1990561 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content44% 
IMG OID640472083 
Producthypothetical protein 
Protein accessionYP_001156685 
Protein GI145590088 
COG category[S] Function unknown 
COG ID[COG3117] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTTAA ATTCTCAACA CCTTAAAGTT ACCCTTGGGC GCAGTCTTTT ACGGCTGATG 
CCCCTGATTT TGATGGGCAC GTTGACTCTA GCTACTTTTT GGCTAGTTCA AAAAAATAAC 
CCCGCAGAAA AATCCCAGCT TGAGCGTGTT CGTCTTCACG AACCTGACTA CATTATTGAA 
GATGGCTCTC TTTCGGCACT CAATGAACTG GGTAATACTA AATATAGAAT TCTGGGAAAT 
AAAGTCACTC ACTATGATGA TGACGCTTCG ATTGATATTG AAGTGCCGCG CATGCGTTTA 
TTTCAACCAG ATAAAGCGCC TGTGACTGTG AAATCCAAAA CAGGTCATCT TGATGGAGAC 
CTCTCTATTT TGGAGCTATT TGATAATGCT TCGATATTTA GACCTGCACA GCCTGCCAGC 
GCTACAGAGC CAGCCACACT TCGCATGCTA GCCTCCTCAA GCTATTTTAA AGTCTTCATT 
AACGACGACA TCATTGAGAC TGATAAACCC ATCACCCTCG AGCAAGGCAT GTCAATCATG 
ACCTCAACTG ACGGCGGTAC ATTCGACAAT ATCCAACAAA GCATGGTGTT ATCAGGTCAA 
GTGAAGGGGC GTATTGAACG CGCACCACGG GGAACACAAT AA
 
Protein sequence
MALNSQHLKV TLGRSLLRLM PLILMGTLTL ATFWLVQKNN PAEKSQLERV RLHEPDYIIE 
DGSLSALNEL GNTKYRILGN KVTHYDDDAS IDIEVPRMRL FQPDKAPVTV KSKTGHLDGD 
LSILELFDNA SIFRPAQPAS ATEPATLRML ASSSYFKVFI NDDIIETDKP ITLEQGMSIM 
TSTDGGTFDN IQQSMVLSGQ VKGRIERAPR GTQ