Gene Pnuc_1895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1895 
Symbol 
ID5053285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp1971529 
End bp1972149 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content44% 
IMG OID640472069 
Producthypothetical protein 
Protein accessionYP_001156671 
Protein GI145590074 
COG category[S] Function unknown 
COG ID[COG3165] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.254922 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATACAT CATTTTCTAC AACCCACACC ATCGCTGCCG GTGCTGCTTG CCGGGGTATT 
AATCATGTTT TGAGCTCTGA GCCCTGGGCT TGCACTGAAT TGGCGAAGCA TTCTGGCAAA 
ACCGTGCTTT TAGAGCTTCC TCTGGGCAAG ATGTGTTTTG AGATTAATTC AATCGGATTT 
TTAGCTGCTG TTAAAGAGGG CGACCATTCC TCTCTTGTAT TGGAGGTCTC ATCAAAAGCG 
CTTGCAGAGC TAATGGGCGG TCCTGGAAAT TTACGCGAGC AAGCCTTTAA AGCGGTGAAG 
ATTACTGGTG ATGCAGATTT GGCGCAGTTG ATCGGAAGGC TTGCAGGACA ATTACGCTGG 
GAGTATGAGG AGGATTTGGC TCGCCTAGTG GGTGATGCAC CCGCTAACTT CGCAGTGAGA 
AAAGGGAAAA AATTGATTTC TGCTACTCGC TCTGCGGCAA CTGATTTACT AGACAATGTA 
GTTGAGTATG TCAGTGAAGA AAGAAAAGTG CTTTTAAACC AGCGAGATTT TATGGTTCGT 
AAAACCGAAT TAAATAATTT GCGTGATTCT GTAGATCGTA TAGAAAAACG CATTCAACTC 
TTAGAGCAAA AGGCTAAATA A
 
Protein sequence
MNTSFSTTHT IAAGAACRGI NHVLSSEPWA CTELAKHSGK TVLLELPLGK MCFEINSIGF 
LAAVKEGDHS SLVLEVSSKA LAELMGGPGN LREQAFKAVK ITGDADLAQL IGRLAGQLRW 
EYEEDLARLV GDAPANFAVR KGKKLISATR SAATDLLDNV VEYVSEERKV LLNQRDFMVR 
KTELNNLRDS VDRIEKRIQL LEQKAK