| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1776 |
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| Symbol | |
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| ID | 5052059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 1849030 |
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| End bp | 1853184 |
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| Gene Length | 4155 bp |
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| Protein Length | 1384 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640471949 |
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| Product | membrane protein-like protein |
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| Protein accession | YP_001156553 |
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| Protein GI | 145589956 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3164] Predicted membrane protein |
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| TIGRFAM ID | [TIGR02099] conserved hypothetical protein TIGR02099 |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTCAAA ACATCATTCC ACCCCGCCTT AAGCGCGTTC TTACAAAACG TCCCCCAGGG
TTGGGCAAAG CCTGGCTCAA ACGCATTCTG ATTTTGATTG GGCTTGTCTG CGCACTTTTG
GTGATAGGTC ACTTGGGAGT GCGTTATGTA CTTTGGCCGC AACTTGAAAA ATCCAAAGCA
TCCGTCGAAA AAATTATTGG TGCCCGCATT GGTGCAGAAG TATCAATCGA CAAACTTCAA
GTGGCATGGA CTGGGCTTTG GCCTAATTTT GAAATAGAAG GACTTCGCTT TAATAGCGCA
GAAAAATCAA AACCTTTATT GCTGATAAAC AAAATTTATG GGGAATTAAG CTGGAAATCT
TTTTATCACC TAGCACCCTA CTTTCGCGAT CTTCATTTTG AAGGCGCTGA AATTTATGCG
CAGCGTAATA ACAATGGAGC AATTAGTATT GCCGGAATTT CAATCGATTC AAATTCAAAT
GATTTCTCAG CTGAAAATTG GCTATTCTCA CAAAATTCTA TTGAAGTAAA TAATGCCAAA
CTATTTTGGG ATGATCAGAA GAATAAGAGA CCTATCACCT CTGTAGAAAT TGTGAGTCTA
TCTCTAGACA ATGGTATTCG CAAACATGAA GGTTCTATTC GCCTAAATAC TCCTTGGGCA
AATGGTCCAG CAGAGATGAA GGTCAGTTTT GTTCCTCACC TTGCAGGGCA AGCAGGCAAT
TGGCGCGACT GGATCGGCAC TATTTACTGG AACCTAAGCG ATCTTGATCT GAAACAAATT
TCTCAGCAAT TTAGCATCAA CCTGACGACG CTTGAGGGAA TACTCAGCAG TAATGGCCAA
CTCAAAATCG ACAATGGCCA CCCTGACGGT GGAGAGTTTT ACGTTGCCGC AGACCAACTG
ATTATCCAAA CCTCCAAAGA TACCGAGGCG ATTGCCTTGG GTAGATTGGA AACAAACTTA
AGCCAAGAAA CAAATGATGG CCTGCTCTCC ATCTCCACTA AAACATTTGC ATGGAGTGAG
TTGGGTAGCC CAAAAACAGC AGCGCTAGAG CATTTAAGCC CGATGACTTT TCGTTGGCGG
TCACCAGGAG CTGATGGAGA GATTAAGGAA TTCGGATTTT CTTCACCCAA GATATCTGTA
GAGGATGTCG CTTTATTTGC TCAAAATCTA CCTCTCTCTA AAAAGGTGCA TGGCTGGATT
AAAGCTTCCA AGGCAGATGG CGAACTAGAG GATGTCGAGA TCCACTGGTC GGAGAGCAAG
TCCCCGCTAT CAGCGCTCAA CATCCCAGGA GGTTGGTTTA AGTCCAATAA ACTCGATTTT
TCTATCAGCG CCAAATTAAT TAACTTAAGT TTTGATGGTA TCAATAGCTC AATCCCTAGC
GTCTCCAATC TATCGGGATT TATAAGCGGC AATCAAAACG AAGGAAGTTT CTCATTAAAT
TCCAACAATC TTGAATTAGA GATGAATGAC TTTTTGGATG ATCCTAAAAT TTCTTTAGAT
CGTGCAAAAG GTCAAATTAA CTGGTCTAAA GAGCGAGGTA AATGGGTGGT AAACGCCAAG
AGTTTGGCGC TCAGCAACCC TGAAATCAAC ACCACCCTAA AACTGAACTA CATCATCGGG
GATGCTAAGA AGCCAGACTT CATGGCATTA GACATGGATT TTTCCAAGGC AAACTTAGTC
AGTGCCTATC GATATCTCCC GGTAGGAATG GATAAGGAAG CGAGGACCTA CCTAAGCAAA
GCCTTTACTG CAGGAACAAT AGAAAAGGGT GAGTTACACA TTCAAGGTGA CCCGAATGGG
GTCCCTTTCT CTGCACCCAA TAGTGGGCAG TTCACATTGA ATCTCCCTAT TGTGGGAGCA
AGCTTTACTC CAATGCCTCT ACTCCCAGCC AATCAAGGTA CCTGGTCTAC CTTTACCAAT
ATTAATGGTG TCATCACAAT GCAAAACGCA AAGTTAGACA TAGATATTGG AAAAGGAAAT
TACAAACAAG TTGCCTTAAG TAACTTTCAT GCGGACATTC CAAGCGTGAG TGCTAAACAA
ATGCCCCTGA ATGTCAGTGG CGCAGCGCAA GGTGAGGCAC CGCAGATGCT GGAGTATGTA
TTTGCCTCGC CTATTGCGAA GAAAATAGAT AACCTTGAAA AAAATCTACG GATAACAGGG
GCAACAAAGA TGTTATTAGG TCTCAATATT CCCCTTTCCG GAAACGCTGA TACTAAAGTG
GATATCAAGC TAGATTTCCC AGGAAATCAT CTTCAATGGG GAGATACCCC GCCATTTGAT
AATCTCAAGG GAAGGGTTCG TATTACTGAA ACAAATCCAG AATTTGAGGA TGTGACCGCT
AACTTCATGG GGGGTGCATT TAAAATCTCG AGTGCACCTG AAGCAAAAAA TAACAACACT
TTTAATATTT CTGGTGACAT AGCCGCTAGC TTCCTTAAGG ACTACCTTGC AAAAGATGCA
GACTTAAAAC TCGCGTCTGT ATTGCAGAGT ATGAGCGGTT CAGCAACGTA TGAAGGTGCC
GTTAGCTTTA ACAAGGGGAA CAGCGAAACA AATCTGAAAT TTGATTTACG CAACTGGGCG
AGCACCGCAC CTGCGCCCCT AAATAAACCC ATGGGTATGC CACTATCAGG CCGAGTGACT
CTCAAAGATT TCGCCGATGA AAAAGTAAAT GTCAATCGTT TTAGCTGGTC CGGTAAGTTG
GGTGACCTAT ATTCATTTGA GGGTGAGTTA GGCAACGACA GCAAATTACG TCATGCCGCA
GGCATCGGGG CTCCTGCCAT TTTGCCGCCA GAAGGGTTTC AGTTAAATAT TAATAGTAGT
GAGCTGAATC TAGATACCTG GAATGATTTT TTAGATAATC AGAGCAAAAA AAATGCTTCT
GTTCAAACCG AAATTACTAG CCCAGGTAAC CTACTCATTA CAGCGCAAGT AAAAAGACTG
ACTCTCGGAG ATCGAGTATG GCCCGAAGTG AATCTCTCAG TGAATAACAA GAACGGTCCA
TGGAATTTTC GCCTGAACTC ACCCCTAGTC AGTGGCCAAG TGCAATATCA ACAGGCTAAC
AAAGCACAAC CCAGTGGTTT TGTCGGCGGC CATCTTGCAC GCCTCTTAAT CCCTGACGCT
GAAAATACTG AGCCAGAGAA AACTGCTTCC AAGCAAAAAG TGGTAATGAA TAAAGCGAAA
TTGAGCCCCA ATTCTATTCC GAGCATGGAT CTCATTATTG ATGAGTTTTC ATGGTCAAAG
GCGCAACTTG GACAAGTCAA GTTGAAGTCT AAAACTAGTG ACAATATTTT TAAAGTTGAT
CTATTGCAAA CAAGTAATCC CCAAGCCTCC ACGACTGCTA GCGGACAATG GATTGGTGGC
ACTAAAAATG AAGTAGATCA CACCACGCTA AAAGTGGATA TGGATATAAA AGATGCCGGT
CATCTAATAG CCCATTGGAG CCCTCAGAAA TCGATTGAAG GTGGGCAAGG CAAGCTGAAT
GCAACTGTGG AGTGGGATGG CTCTCCATAT CAGCCAAACT ATGACACCTT ATCCGGCAAA
GCAAGCCTCA ATCTTGAAAA AGGTCGTCTA CTGGAAGTTA ACTCGAGTGG CGCAAAGATA
TTGGATGTGC TTAGCCTTCA AAGCTTATTT AGATTTGCCA CAATGGATAT CGAAGGTGGG
CTGGGCAACA TCGTTACTAA GGGTACGCCT TTTAAATCTA TCGATAGCTC TTTTGACATT
GCCAATGGCA TTGCCGATAC CACTCAGTTC ACCATGAATT TAGATCAAGC TAGGGTAGCT
ATGAATGGAA AAATCAACAT CCCTAAACAA ACTCAAGATT TACGTATCGC TATCTACCCA
AGCATTGATG CAACTGCAGG TTCCTTAGCT GCGTTTGCTA TTAATCCAAT CGTAGGATTG
GGTGTTCTAG TGGGGCAATA TTTAGTGAGT GGGCAAATTA ATCGCAGCCT GCAGTCGGAC
TATTTAGTCC AAGGCTCATG GGAAAATCCA GAGGTAATAG CCCTTGACCA AAAAGGTCAG
CCAATTGATG AAAAGGTTTT AGAAAGCATT CGCAATAAAG AGTTGCTGAA AGAGCAAAAT
AGGCCAGATG TTCCTAGACC ACAAAATACT GCACCCCTAA ACAACCAAGG CACTTCATCT
AACAACTTAA ATTAA
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| Protein sequence | MLQNIIPPRL KRVLTKRPPG LGKAWLKRIL ILIGLVCALL VIGHLGVRYV LWPQLEKSKA
SVEKIIGARI GAEVSIDKLQ VAWTGLWPNF EIEGLRFNSA EKSKPLLLIN KIYGELSWKS
FYHLAPYFRD LHFEGAEIYA QRNNNGAISI AGISIDSNSN DFSAENWLFS QNSIEVNNAK
LFWDDQKNKR PITSVEIVSL SLDNGIRKHE GSIRLNTPWA NGPAEMKVSF VPHLAGQAGN
WRDWIGTIYW NLSDLDLKQI SQQFSINLTT LEGILSSNGQ LKIDNGHPDG GEFYVAADQL
IIQTSKDTEA IALGRLETNL SQETNDGLLS ISTKTFAWSE LGSPKTAALE HLSPMTFRWR
SPGADGEIKE FGFSSPKISV EDVALFAQNL PLSKKVHGWI KASKADGELE DVEIHWSESK
SPLSALNIPG GWFKSNKLDF SISAKLINLS FDGINSSIPS VSNLSGFISG NQNEGSFSLN
SNNLELEMND FLDDPKISLD RAKGQINWSK ERGKWVVNAK SLALSNPEIN TTLKLNYIIG
DAKKPDFMAL DMDFSKANLV SAYRYLPVGM DKEARTYLSK AFTAGTIEKG ELHIQGDPNG
VPFSAPNSGQ FTLNLPIVGA SFTPMPLLPA NQGTWSTFTN INGVITMQNA KLDIDIGKGN
YKQVALSNFH ADIPSVSAKQ MPLNVSGAAQ GEAPQMLEYV FASPIAKKID NLEKNLRITG
ATKMLLGLNI PLSGNADTKV DIKLDFPGNH LQWGDTPPFD NLKGRVRITE TNPEFEDVTA
NFMGGAFKIS SAPEAKNNNT FNISGDIAAS FLKDYLAKDA DLKLASVLQS MSGSATYEGA
VSFNKGNSET NLKFDLRNWA STAPAPLNKP MGMPLSGRVT LKDFADEKVN VNRFSWSGKL
GDLYSFEGEL GNDSKLRHAA GIGAPAILPP EGFQLNINSS ELNLDTWNDF LDNQSKKNAS
VQTEITSPGN LLITAQVKRL TLGDRVWPEV NLSVNNKNGP WNFRLNSPLV SGQVQYQQAN
KAQPSGFVGG HLARLLIPDA ENTEPEKTAS KQKVVMNKAK LSPNSIPSMD LIIDEFSWSK
AQLGQVKLKS KTSDNIFKVD LLQTSNPQAS TTASGQWIGG TKNEVDHTTL KVDMDIKDAG
HLIAHWSPQK SIEGGQGKLN ATVEWDGSPY QPNYDTLSGK ASLNLEKGRL LEVNSSGAKI
LDVLSLQSLF RFATMDIEGG LGNIVTKGTP FKSIDSSFDI ANGIADTTQF TMNLDQARVA
MNGKINIPKQ TQDLRIAIYP SIDATAGSLA AFAINPIVGL GVLVGQYLVS GQINRSLQSD
YLVQGSWENP EVIALDQKGQ PIDEKVLESI RNKELLKEQN RPDVPRPQNT APLNNQGTSS
NNLN
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