Gene Pnuc_1720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1720 
Symbol 
ID5051990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp1791662 
End bp1792120 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content43% 
IMG OID640471893 
Producthypothetical protein 
Protein accessionYP_001156497 
Protein GI145589900 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.518273 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAAATCC GCAATCAAAA AGATTTTGGG GCCGGCCTAA TGTATATGGT CATCGGCCTC 
TTTTTCACCT ACATGGCCAC CCAATATCAA ATGGGAACGG CCGCCAAAAT GGGCCCTGGT 
TATTTTCCGT TCTGGCTTGG CCTGGTAATG ACTGCTTTAG GCCTTCTTAT TCTTATCAAA 
TCTCTCAGCG CCAAAGCAGC GATTGAAAAG ATTCCACCAT TCAATTGGAG GGTAATCGGA 
CTCATTACAG GCTCAGTAGT TTTATACGGA ATACTGTTAC CGACGATGGG CTTTATTGTG 
GCCGTCTTTG TGTTGGTATT TATGTCTGCA AGTGCAAGTC ATGAATTTAG TTGGAAGGGT 
ACATTGGTTA ATGCAATCTT CCTCATTGCC TTTACTTATT CGGTATTCGT TTTGGGTCTC 
AAGCTTCAGT TCCCATTGCT ACCTTTCTTT CTTCAATAA
 
Protein sequence
MEIRNQKDFG AGLMYMVIGL FFTYMATQYQ MGTAAKMGPG YFPFWLGLVM TALGLLILIK 
SLSAKAAIEK IPPFNWRVIG LITGSVVLYG ILLPTMGFIV AVFVLVFMSA SASHEFSWKG 
TLVNAIFLIA FTYSVFVLGL KLQFPLLPFF LQ