| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1679 |
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| Symbol | |
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| ID | 5052310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1743589 |
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| End bp | 1744818 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640471852 |
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| Product | hypothetical protein |
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| Protein accession | YP_001156456 |
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| Protein GI | 145589859 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAT TGATTCTATT TGCTACATTT ATTGGAGTTT GTTCTTCAGC ATTAGCTAAT
AATTTATTGC CAACTGATGA ACAGGTAAAA AATGCTCTGT ATTCCAACCC TAAGATTGGA
GCTGCGGATG CGAGAAAGGA CTCTTTAAAT TACAGGGCTG ATGCCATCGC CTCGGGTTCG
CAAGAGTTTG TTGTCAGGGG CTCTAGACAA AATCGAAGAG TAACCAATAT ACCGGGAGCC
ACAAATTATC AAGAATACTG GGCGGGTATT GAGCGTCCAA TCCGTTTTTG GGGTAAAGGC
GGTGTTGATG AGAAGATTTC CGATGCCACC AAGTCATTTG CCGGAATTGA GTATGCCGAT
ACTATGCATG AAACCAGCAA GGATCTATTA GCAACCTGGT TTACTTATCT TAAAGCGCTT
CAGTCAAGAA TTGTTGCCGA GAAAAATAGC CAGCTAGGCG ATCAAATTGG CCGGATTGCT
CAAGTGCGCT ACAAGGTTGG GGATGTAGCT AGATTGGATG CTCAATTAGC AACAGCGGAG
CAAGGTAGGC TAAAGGCCTT CTTAGAGCTT GCTAAAGCAC AAGAAAGCGT AAGCGGTGAA
TCAGTCACGC AGAGATACCA AGGCATCGCA TTAATTAAGA ACTTTAAATG GGATGTAATT
CCTAATCTTC AAACTAGGAA GGAATTACTA CGTCAACAAT TTCTTGAGCG AAGTCATGAA
TTAAAGCTAG CTAAATCAGA TGCTGATCGA TTTGATTTGC AAGCTAAACG CAGTGGCTTG
GACAGGTTTC CGGATCCAAC CGTTGGCCTA TATACCGCCA ATGAGTTTGG TGGCGCCGAG
AGAATTAATG GTGTTAGTTT ATCGTTCCCA ATATCCGGTA GCGCTCGTTT TTCTAATGCT
TCTGCGGCAG CATCTGAAGC AGAAATGAGT CGCCAAAGAG TTATAGAAAC TGAGCAACGC
ATTAGCGTTG AGTTTGAACG CTTATGGTCG CAGATGATGA GTAGAAAAAC GGCGGCTGAA
ACATTGCTAA ATTCCGCAAA AAGCCAGAAT GATGCTGCGC AGGCGGCTGA AAAAGCCTAT
GTGCTGGGCG AGGGCACTAT CTCAGATTTG ATTGCTGCAA GAAAAGCCGC CAATGAGAAT
CAGTTATCGG CTGACCTTAT GCGGCTAGAT GCACTGGAAT CTTACTATCG TATGCGTTTG
GATTTGCACG AGATTTGGGA CTTTGATTGA
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| Protein sequence | MKKLILFATF IGVCSSALAN NLLPTDEQVK NALYSNPKIG AADARKDSLN YRADAIASGS
QEFVVRGSRQ NRRVTNIPGA TNYQEYWAGI ERPIRFWGKG GVDEKISDAT KSFAGIEYAD
TMHETSKDLL ATWFTYLKAL QSRIVAEKNS QLGDQIGRIA QVRYKVGDVA RLDAQLATAE
QGRLKAFLEL AKAQESVSGE SVTQRYQGIA LIKNFKWDVI PNLQTRKELL RQQFLERSHE
LKLAKSDADR FDLQAKRSGL DRFPDPTVGL YTANEFGGAE RINGVSLSFP ISGSARFSNA
SAAASEAEMS RQRVIETEQR ISVEFERLWS QMMSRKTAAE TLLNSAKSQN DAAQAAEKAY
VLGEGTISDL IAARKAANEN QLSADLMRLD ALESYYRMRL DLHEIWDFD
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