Gene Pnuc_1637 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1637 
Symbol 
ID5052605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp1704114 
End bp1705094 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content43% 
IMG OID640471810 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_001156415 
Protein GI145589818 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.115399 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTAT TAGTTACTGG TGGAGCTGGA TTTTTAGGGC AAAAACTTGC TAATCAGTTA 
TTAAGTCGTG GGTCTTTAAA AGACTCGGAT GGGGCCGAGC AAAAAATTGA GCAACTCATA 
CTGGTTGATG TTGTTAAGGC CAATGATTTT GGCGATTCAC GAGTTAAGGT GATCGCTGGA 
GATATTGCGG ATCCTAAGCT CATTCAGGGA TTGATTACCC CAGAGATTAA ATCTATCTTT 
CACTTAGCCG CTATCGTTAG CGGCCAAGCA GAGGCTGACT TTGACTTAGG AATGCGAATT 
AATCTGGATG CTGCACGACT ATTGCTAGAG GCTTGCCGCA AAGCGGGGCA TAAACCCAAA 
ATTATCTTTA CTAGTTCGGT AGCTGTATAC GGTGGAGCTC TTCCAGAGAT GGTTTTGGAT 
ACAACAGCCT TAAACCCTCA ATCATCGTAT GGCACTCAAA AGGCAATCTG TGAGCTTTTA 
CTTAATGACT TCACTCGCAA GGGTTTTGTA GACGGCAGGG TATTACGTTT ACCCACTATT 
AGTGTTCGCC CTGGAGTTGC TAATAAAGCA GCATCTTCGT TTGCTAGCGG AATCATTCGC 
GAGCCTTTAA ATGGTCAACC TTCCATTTGC CCAGTTTCAC CTGACTTGCG TATCTGGTTG 
TTATCACCCC TTTATGCCAT TGAATCTTTG ATTACTGGCC ATGACTTAGA TTCAAGCAAA 
TTGGGCTTGA ATAAGTCAAT CAATCTTCCT GGTGTTTCAG TAAGTGTTGG TGAAATGATT 
GAAGCACTAC ACAAAGTGGC TAGTGAAGAG ACTGTTTCTC TCATTTCCAT TGAGCCAGAT 
CCAAAGGTAG AGGCGATCGT AAGAAGTTGG CCTGCATCCT GGGATGCCAG CAGAGCTCAA 
GCATTGGGTT TAAAGTCTGA CCCCAATTTT CAAAGTATTG TTGAGGCCTA TATTGAGGAT 
GAGCTTAAAG GTAAGAGTTA A
 
Protein sequence
MKVLVTGGAG FLGQKLANQL LSRGSLKDSD GAEQKIEQLI LVDVVKANDF GDSRVKVIAG 
DIADPKLIQG LITPEIKSIF HLAAIVSGQA EADFDLGMRI NLDAARLLLE ACRKAGHKPK 
IIFTSSVAVY GGALPEMVLD TTALNPQSSY GTQKAICELL LNDFTRKGFV DGRVLRLPTI 
SVRPGVANKA ASSFASGIIR EPLNGQPSIC PVSPDLRIWL LSPLYAIESL ITGHDLDSSK 
LGLNKSINLP GVSVSVGEMI EALHKVASEE TVSLISIEPD PKVEAIVRSW PASWDASRAQ 
ALGLKSDPNF QSIVEAYIED ELKGKS