Gene Pnuc_1621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1621 
Symbol 
ID5052189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp1688548 
End bp1689558 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content42% 
IMG OID640471794 
ProductMg2+ transporter protein, CorA family protein 
Protein accessionYP_001156399 
Protein GI145589802 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0598] Mg2+ and Co2+ transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGATC TAACACTGAA TTCTTTTCCG ATTGATGGCG TAGTTTTTGC TTGGGCAATG 
ACCAGTTCGG GCGAGAACTA TGAAATTCCC TTGGATCAGA TTACGGAAAA ATTAGATGAT
TCCCAGCAAT CTATCTGGTT GCACCTCAAT TTAGCCCATT CCCAAGTTCA ACGCTGGCTT
GATAAAACAC CCCTGATCCC TGAGCGTGTT GTAGAGATGA TTCATGAGGG GGTGACCCGA
AGTCGTTTGG AAAGAATTGA AAAGTTAGAC GATTGTTTAT TAATGGTGAT GAATGATTTT
CACCAAGAAT TTGGTGTCAA AGAGGGTGAG GCAACATTAG GCACCTTATG GGCCATCCTG
ACTCCGAGAT TGATGATCTC GCTAAGAAAT AAGCCACTCA ACACCACGGA TAAATTAAGG
GCCGACCTTA GAGATGGGCA ATTACACCCA CACTCTGCAA TCGAGTTATT TCATGAATTG
ATCGATTTAC GAGCTGAATA CCTAAGGACT TTGCTAATAC GCCTATCTGA AAAGATGGAC
GATTTAGAGG AATTATTATT AAAGGGCCGT GAAATTCCAG AACATGAAAA TTTAGGTCGA
ATTCGCATTC ATTGCAGTCG CTTACGACGT CAGTTTGCGC CTGAGTTAGT TGCGCTTCAT
CGATTACAAA AACACTTGCC TTATTGGTTC TCGGCTCAAG ATAAAACGAG ACTGAGTGAT
GATTTAGATC TACTATCCTT TTTAGTTCAA GATATTTCTA ATCTCTATGA CAGGGCGAAG
GTATTGCAGG ATGAGCAGGC TGCGCACGTA GCAGAATTTA ATGCCCGTAA CTTACAAGTT
TTGTCCATCA TGACTGTCAT ATTTCTCCCA ATGACTCTAC TAACGGGAAT TATGGGAATG
AATATGGAAG ATTTGCCTGG ACTTAAAGGC TCTTTTTATG GGGTGATGAT GCTCATGGCT
GCTTGTGGTG GCCTTGTCTA TGCAGGCCTC AAGTACAAAA AAATTATTTA A
 
Protein sequence
MSDLTLNSFP IDGVVFAWAM TSSGENYEIP LDQITEKLDD SQQSIWLHLN LAHSQVQRWL 
DKTPLIPERV VEMIHEGVTR SRLERIEKLD DCLLMVMNDF HQEFGVKEGE ATLGTLWAIL
TPRLMISLRN KPLNTTDKLR ADLRDGQLHP HSAIELFHEL IDLRAEYLRT LLIRLSEKMD
DLEELLLKGR EIPEHENLGR IRIHCSRLRR QFAPELVALH RLQKHLPYWF SAQDKTRLSD
DLDLLSFLVQ DISNLYDRAK VLQDEQAAHV AEFNARNLQV LSIMTVIFLP MTLLTGIMGM
NMEDLPGLKG SFYGVMMLMA ACGGLVYAGL KYKKII