| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1612 |
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| Symbol | |
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| ID | 5053418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1678657 |
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| End bp | 1679817 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640471785 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_001156390 |
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| Protein GI | 145589793 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTAATT CTTCTTTGCT TTCCGGCGTT ACTGTTATTG ATTTATCTAG AGTACTAGCC
GGTCCTTTTT CTACCATGAC CCTAGCTAAT TTAGGTGCTC GCGTGATTAA GGTAGAAATT
CCGGGAACAG GTGACGACTC TCGTGCATTT GGACCATTTC ATAACGGCAA ATCACTGTAC
TTCGCATCGA TCAATTGCAA TAAAGAAAGT ATTGCGTTGA ATTTAAAAAA TCCTGAAGAT
CGCGCTATTT TTGAGAAGTT GCTTGAGAAG GCCGATATCT TGGTTGAAAA CTATCGACCA
GGAACGATGG AAAAGCTAGG TTATGGTTGG GGTACCTTGC ATGCTAAGTA TCCAAAATTA
ATTTATGGCG CTGCATCTGG TTTTGGTGAC AGCGGCCCTT ACTCCAAACG TGCTGCGTAT
GACATGGTGG TGCAGGGTAT GGGCGGCGTG TTGAGTATGA CTGGCTATCC GAATCAACCT
CCTGCTCGCG TAGGTATTTC TATTGGAGAT ATCACTGCAG GATTGTATTT AACCATTGGC
TTAAATGCTG CTTTATACAA TCGCACAGTA ACTAAAGTAG GCTCAAAAAT TGATATCGCC
ATGCTTGACT GTCAGGTTGC CATTTTGGAG GATGCTATTC CCGCTTATGA CAAGACTGGC
GAGATCCCAG GCCCATTAGG CACTCGCCAT CCTTCCATTG CGCCATTCCA AACCTTCGCT
GCAAAAGATG CCAGCATCGT GATCGCTGCT GGTAATGATC ATTTATTTGA TTTGATGACT
CAAGCATTGG CTCGTCCAGA TTTATTAACG GATGCGCGCT TTAAGACTAA TGAATTGCGT
CATGAAAATA TTGATGTCTT ACAAAAAGAA ATGGAAACCA CACTTGCTGC GAAGACAGTA
GCTGAGTGGT TGGTTGCGTT AAATACGGTC GGCGTTCCTT GTGGTCCAAT TAACGATGTC
CCTCATGTCA TTGCAGATCC ACAAGTTGCC GCACGAAATA TGGTGATTGA AGTAGATGAT
CCCGTCATTG GAAAAGTAAA AACTGCTGGT AATCCTGTGA AGGTAGTGGG TGCAGTAGAT
GAGGTGACCT TAAGGCCTTC TCCCGAGTTG GATGCCAATC GTGCGGCTAT CTTGGCTGAA
TTCGTTGGAG TAGGTAAATG A
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| Protein sequence | MSNSSLLSGV TVIDLSRVLA GPFSTMTLAN LGARVIKVEI PGTGDDSRAF GPFHNGKSLY
FASINCNKES IALNLKNPED RAIFEKLLEK ADILVENYRP GTMEKLGYGW GTLHAKYPKL
IYGAASGFGD SGPYSKRAAY DMVVQGMGGV LSMTGYPNQP PARVGISIGD ITAGLYLTIG
LNAALYNRTV TKVGSKIDIA MLDCQVAILE DAIPAYDKTG EIPGPLGTRH PSIAPFQTFA
AKDASIVIAA GNDHLFDLMT QALARPDLLT DARFKTNELR HENIDVLQKE METTLAAKTV
AEWLVALNTV GVPCGPINDV PHVIADPQVA ARNMVIEVDD PVIGKVKTAG NPVKVVGAVD
EVTLRPSPEL DANRAAILAE FVGVGK
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