Gene Pnuc_1572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1572 
Symbol 
ID5052575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp1644365 
End bp1644991 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content41% 
IMG OID640471745 
Productparaquat-inducible protein A 
Protein accessionYP_001156350 
Protein GI145589753 
COG category[S] Function unknown 
COG ID[COG2995] Uncharacterized paraquat-inducible protein A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.962502 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGATTCA ATGAAATCTT AGTATGTGAT CAATGTGATC TATTGTTGGA TGAAATTCCG 
CTAGAGCCAG GAGGCAAGGC CGCATGTTCT CGCTGCGGCA ATATTTTGTA CCGCAATAAA 
CCTAATGGCT TACGACTGAG TTTAATGTTC TCGCTCACAG GCGCCGCATT GTTTCTAGTA 
TCGAATTATT TCCCCATCGT TACTATTGAT TCGAATGGGC TGAGCAATTC CACTACATTG 
TTGGATGCAC CATATCGGTT GGTTCACGAT GGAATTCCAA GCATTGCCGC CTTAGTATTT 
GCTACTACAT TTCTAATGCC AGCACTTGAA ATTCTCGCTT TAATTTATTT GTTATTTCCC 
TTAAGTTTAG GACGCTTACC CCCGGGATTT TCATATGCGT TTCGATTAGT GCATTTTGTA 
AAGCCTTGGT CAATGATTGA AGTATTTATG TTGGGCTTGC TAGTGACGAT TACTAAGCTC 
AATGCATTTG CATCAGTGGT CCCAGATATA GCTTTAGGAT CTTTTGTGTT CCTCATGTTT 
ACGGTGACTG CTGCTGCAGC TAATTTTGAT CCGCATAGTT TTTGGAAGCA GATCGAAATT 
GTCAAAGCTT CGCAAGGAAA AATATGA
 
Protein sequence
MGFNEILVCD QCDLLLDEIP LEPGGKAACS RCGNILYRNK PNGLRLSLMF SLTGAALFLV 
SNYFPIVTID SNGLSNSTTL LDAPYRLVHD GIPSIAALVF ATTFLMPALE ILALIYLLFP 
LSLGRLPPGF SYAFRLVHFV KPWSMIEVFM LGLLVTITKL NAFASVVPDI ALGSFVFLMF 
TVTAAAANFD PHSFWKQIEI VKASQGKI