Gene Pnuc_1568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1568 
Symbol 
ID5052916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp1640636 
End bp1641424 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content40% 
IMG OID640471741 
Producthypothetical protein 
Protein accessionYP_001156346 
Protein GI145589749 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.471607 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAATT TCATCATTCA GGATTTTCAA TTTATAGCAA TCATGGTCGC CCTTGCAGCG 
TGTTCAGTAT TTGCTATTAC CTGGTTTCTA GAGAAATCTC CGCTGTCAAA TTGGTTTAAA 
AATTCCGAAG GTATCGCAGT TTCATTTATT ACCGTACCTG CATTTTTATT TGGGCTATCA 
ATATCAACAC TATCCTCATC AATCTGGGAT AGCCATGTTT CTGCTAATTC AAGCCTCGTA 
AATGAATCTA CTGCAGTAAG AACGCTAACA AGCATCGCCT CTACGCTACC GCCGCTTGAT 
GGTAAAAGTC TCAATCTAGC TACAAAGAAC TATGTAAGTA CAGTGTTAAA CAAAGAATGG 
CCAGCGATGA AAAGTGAAAA TCCTATTGGG AAAACGGTAG CGCTTGCTGA GTTTGAGAAT 
CTGAATAATG TAGCTAATAC GATTGCTATG CAAATCAATC AGCGTAGCTC AATTGAAGGG 
CATCTTTTAT CGACCATTGA TATCCTGCGT CATGAGAGAC TTCAAAGACT TTCTTTGGCA 
TATGACTCTA CCAATTTCTC GAGATGGCCT TCTGTATTTG TTCTTTCATT CCTGTTGATG 
ATGACGGTTG GATTGCTCCA GCTTAAAAGT CCAAGGGCAA TGCGAATTAC ATTAATCATG 
GGGGCTCTTT GCATCAGCTC AACCATGCTT TTTCTCTATC TCAATATCTC CCCTTATCGC 
GGGATGAATC CTATTAATCC TCAATCGCTG GAAGAGTCAC TCAAGCTCAT TCCCATTTCA 
AACGATTAA
 
Protein sequence
MENFIIQDFQ FIAIMVALAA CSVFAITWFL EKSPLSNWFK NSEGIAVSFI TVPAFLFGLS 
ISTLSSSIWD SHVSANSSLV NESTAVRTLT SIASTLPPLD GKSLNLATKN YVSTVLNKEW 
PAMKSENPIG KTVALAEFEN LNNVANTIAM QINQRSSIEG HLLSTIDILR HERLQRLSLA 
YDSTNFSRWP SVFVLSFLLM MTVGLLQLKS PRAMRITLIM GALCISSTML FLYLNISPYR 
GMNPINPQSL EESLKLIPIS ND