| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1565 |
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| Symbol | |
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| ID | 5052984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 1638369 |
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| End bp | 1639202 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640471738 |
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| Product | ApbE family lipoprotein |
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| Protein accession | YP_001156343 |
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| Protein GI | 145589746 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTCGCT GTAAACCCCT ATTGGGCACT TATGTTGAGA TAAGAGCTGA AATTACCTCG
GGGAAATTCG ATTCATTTGA ATTGAATGAA TGCATTGACA CAGCATTTTC TGCCATTGAG
TTAGTACAAG ACTTAATGGG ATTTCATGAT TCCGATAGTG AGCTATCCAA AATTAATGCT
CGCGCTCACT TAGAAGTACT TGCAATACAT CCGTGGACTT TCGAGGTCCT TAGTATTGCT
AAAGAAATTC ATGAAGCCTC TTTGGGAATA TTTGATTGTG GCATTGGCAG CAAGTTAGTT
GAAGCTGGAC TTCTTCCAAT GCACCGGAAC GTGCCACATC AGATCTGGGG AGGACTTACG
GATGTCATCC TCGAAACTCC TAATCTAGTG AGTTCTACTA AGCCTATGCA AATTGATCTT
GGAGGAATAG CAAAGGGTTT TGCGGTGGAT AAAGCTATTG AGGCTTTAAA AGCTACACAA
GCTGACTCAG GACTAGTCAA TGCCGGTGGC GATATGAGAG TCTTCGGAGC CTTTCCCTAT
GAGATACAGA TTCGCTCACC TTCCAAGCCC AAAGAACTCA TTTTTATTGG CTCTCTACAA
GATGGAGCTA TAGCTAGCAC TGGTCTCTAT TACAGCGATA CCACAAGCAG TTCATCGAGG
AGCCCAATAG TTGACCCCAT GAACATGAAA CAGATTCACT TTACAGAATC CTATTCGGTG
ATTGCGCCTG AATGTATATA TGCAGATGCG CTAACCAAAA TCTTAGCGAT TTCAAAAAAT
AGTGCTCATC CCTGCTTTTC TCAATTTTTT GCTCATGCCA TTCGTATTGC ATAA
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| Protein sequence | MIRCKPLLGT YVEIRAEITS GKFDSFELNE CIDTAFSAIE LVQDLMGFHD SDSELSKINA
RAHLEVLAIH PWTFEVLSIA KEIHEASLGI FDCGIGSKLV EAGLLPMHRN VPHQIWGGLT
DVILETPNLV SSTKPMQIDL GGIAKGFAVD KAIEALKATQ ADSGLVNAGG DMRVFGAFPY
EIQIRSPSKP KELIFIGSLQ DGAIASTGLY YSDTTSSSSR SPIVDPMNMK QIHFTESYSV
IAPECIYADA LTKILAISKN SAHPCFSQFF AHAIRIA
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