Gene Pnuc_1563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1563 
Symbol 
ID5052216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp1637095 
End bp1637439 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content44% 
IMG OID640471736 
Producthypothetical protein 
Protein accessionYP_001156341 
Protein GI145589744 
COG category[S] Function unknown 
COG ID[COG4828] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCAAA TTGAAATCAT CAAAGAAGTT AGTGATGTGA TGGATGCCCT AGGAGTAGGT 
GTTGTCTCTG TAGGTGTGTT GTGGGGACTC ATTTTCTTTA TTAAGAATCT TGCTACTCAG 
ACTGCAGACG TTGCCTACAA AGTTTTTCGC GTTCAAATTG TGCGTTCACT AATCTTGGGT 
TTAGAAGTCT TAGTTGCTGG GGACGTCATT CGGACAGTTG CTCTCAGCCC TACCTTAACG 
AGCGTGGCTG TTTTGGGTGC AATCGTTATG ATTCGATGCT TCTTGAGTTG GTCTCTGACT 
TTGGAGATTG ATGGTCGCTG GCCGTGGCAG GGTAAAACTG ATTAA
 
Protein sequence
MNQIEIIKEV SDVMDALGVG VVSVGVLWGL IFFIKNLATQ TADVAYKVFR VQIVRSLILG 
LEVLVAGDVI RTVALSPTLT SVAVLGAIVM IRCFLSWSLT LEIDGRWPWQ GKTD