| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1559 |
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| Symbol | |
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| ID | 5053147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1630670 |
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| End bp | 1632172 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640471732 |
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| Product | methylmalonate-semialdehyde dehydrogenase |
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| Protein accession | YP_001156337 |
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| Protein GI | 145589740 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCACAA ATCCTCCACA AATTCCTCTT TTTATTAACG GTCAACTAGT TCAATCCAAC
ACACAAGAAT GGCGCGATAT CGTTAATCCA GCGACGCAAG AAGTATTGGC GCGAGTCCCG
TTTGCAACTG CTGATGAATT AAATGCAGCT GTTGCAAGTG CTGCTAAGGC ATTTACGACT
TGGAAAAAAA CGTCGATTGG TGCAAGAGCG CGTATCTTTT TAAAGTACCA GCAACTCATT
CGTGAAAATA TGAAAGAGCT TGCAGCGATT TTGACTGCTG AGCAAGGCAA AACTCTGGCT
GATGCTGAAG GTGATGTCTT CCGCGGACTT GAGGTTGTTG AGCATGCTGC TGCAATTGGA
AATCTCCAAT TGGGTGAATT TGCAAATAAC GTGGCTGGCG GTGTGGATAC CTATAGTCTC
TTACAGCCTA TTGGCGTGTG TGCAGGTATT ACCCCATTTA ATTTCCCGGC AATGATTCCA
TTGTGGATGT TCCCAATGGC AATTGTGACT GGAAATACTT TTGTTTTGAA GCCATCCGAG
CAAGACCCAA TGGTTACTAT GCGATTAGTT GAGTTGGCTG CTGAAGCTGG CGTACCTCCA
GGTGTACTGA ACGTGATACA TGGTGGAGAA GCAGTAGTTA ATGGTATCTG CGATCATCCA
GTTATCAAAG CCGTCTCCTT TGTGGGATCA ACTCGTGTAG GAACACACGT TTATAACCGC
GCTACGCTGA GTGGCAAACG CGTTCAATGC ATGATGGGTG CAAAAAATCA CGCCATCATC
ATGCCTGATG CTAACAAGGA GCAAACTTTA AATAATTTAT TAGGCGCTGC ATTTGGTGCC
GCTGGTCAGC GTTGCATGGC TATTTCAGTA GCCATCATGG TGGGTGATGC TAAGAACTGG
ATGGCAGATT TGGTGGCTAA ATCTAAGACA CTTAAAGTGA ACGCTGGTGT AGAGACTGGC
ACTGATGTTG GCCCATTGGT TTCTCAAAGT GCCTATAGCC GTGTAAGTAG TTTGATTGAA
AAGGGTGCTG CTGAAGCAAA GTTAGAGTTA GACGGAAGGA CGGTAAAAGT TGTCGGATAC
GAAAAAGGCA ACTTTGTTGG CCCAACTATC TTCTCTGATG TCAAGCCTGG TATGACCATT
TATGAACAGG AAATTTTTGG ACCTGTACTA TGCGTGAGCT TTGCCAAAGA TATTGATGAG
GCAATTGCCA TGATTAATAA AAACCCGAAC GGCAACGGTA CTGCAATCTT TACCCAATCT
GGGGCTGCAG CGCGTAAGTT TCAGGAAGAA ATCGATATTG GCCAAGTGGG TATTAATGTG
CCCATTCCAG TGCCAGTCCC CATGTTTTCC TTTACCGGCT CTAGAGCATC TAAACTAGGT
GACTTAGGTC CATACGGTAA GCAGGTTATT GCTTTCTATA CTCAAACTAA AACGGTTACC
GCCCGTTGGT TTGATGATAG TTCTGCTTCC GCTGGAGTAA ATACCACTAT CAGCTTGAAA
TAA
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| Protein sequence | MSTNPPQIPL FINGQLVQSN TQEWRDIVNP ATQEVLARVP FATADELNAA VASAAKAFTT
WKKTSIGARA RIFLKYQQLI RENMKELAAI LTAEQGKTLA DAEGDVFRGL EVVEHAAAIG
NLQLGEFANN VAGGVDTYSL LQPIGVCAGI TPFNFPAMIP LWMFPMAIVT GNTFVLKPSE
QDPMVTMRLV ELAAEAGVPP GVLNVIHGGE AVVNGICDHP VIKAVSFVGS TRVGTHVYNR
ATLSGKRVQC MMGAKNHAII MPDANKEQTL NNLLGAAFGA AGQRCMAISV AIMVGDAKNW
MADLVAKSKT LKVNAGVETG TDVGPLVSQS AYSRVSSLIE KGAAEAKLEL DGRTVKVVGY
EKGNFVGPTI FSDVKPGMTI YEQEIFGPVL CVSFAKDIDE AIAMINKNPN GNGTAIFTQS
GAAARKFQEE IDIGQVGINV PIPVPVPMFS FTGSRASKLG DLGPYGKQVI AFYTQTKTVT
ARWFDDSSAS AGVNTTISLK
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