| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1554 |
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| Symbol | |
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| ID | 5052752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 1625859 |
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| End bp | 1626620 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640471727 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001156332 |
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| Protein GI | 145589735 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.135569 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCAGA AAAATAACAA AGTAGCCTTG GTTACTGGAG CTGGTGTTGG CATTGGAAGG
GCGGCTGCTA AGGCTCTACT TCAAGGTGGC TATCAAGTCG TATTAACTGG TCGCAATCTA
GATAAGCTTC AAAAGGCGAT GGAAACTATT GGCGGCAATC AAGATAATTG TTTTGCATTT
GCCTGTGACG TAGGTAAGCC TGAGCAAGTG AAGAAATTAT TTGCAGCTCT TAAGGAGCGT
TTTGGTCGTA TTGATGTGCT ATTTAACAAT GCCGGTATTG GTGCTCCTGC TATCCCCATG
GAAGACCTCA CATATGAACA ATGGATGGAT GCCGTCAATG CCAATTTGTC AGGTGCATTT
CTGTGTTCAC AAGAAGCAAT TCGCATGATG AAAGCGCAAT CACCGCAAGG CGGCAGAATT
ATTAACAATG GCTCTATCTC TGCACATGCT CCACGCCCAA TGTCAGCACC TTATACCGCT
ACTAAACATG CCATTAGTGG ACTAACAAAA ACTATTTCAC TTGATGGCCG TCCGTTCAAT
ATTGCTTGTG GCCAAATTGA CATTGGTAAC GCAGCAACCG AAATGACGGA ACGCATGGCA
GCAGGCATCA TGCAAGCTGA CCAGTCGATT AAGGTTGAGC CCCGAATGGA TGTAGACCAT
GTGGGTCAGG CTGTTTTGCA CATGGCCCAA CTTCCTCTCG AGAGCAATAT TCTTTCGATG
ACTATTATGG CTACCAATAT GCCGTTTGTA GGAAGAGGCT AA
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| Protein sequence | MSQKNNKVAL VTGAGVGIGR AAAKALLQGG YQVVLTGRNL DKLQKAMETI GGNQDNCFAF
ACDVGKPEQV KKLFAALKER FGRIDVLFNN AGIGAPAIPM EDLTYEQWMD AVNANLSGAF
LCSQEAIRMM KAQSPQGGRI INNGSISAHA PRPMSAPYTA TKHAISGLTK TISLDGRPFN
IACGQIDIGN AATEMTERMA AGIMQADQSI KVEPRMDVDH VGQAVLHMAQ LPLESNILSM
TIMATNMPFV GRG
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