| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1546 |
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| Symbol | |
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| ID | 5052591 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 1615705 |
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| End bp | 1616631 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640471719 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001156324 |
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| Protein GI | 145589727 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0468693 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATAA ATCATATATA CTTTATTTAC ATGAGAAAAA TTCCAAATTA TGTCTTATTA
AGGGCTTTTG AGGCCGCAGC GCGCCTAGAA AGCTTTACGC TTGCGGCAAA AGAGTTGCAC
CTAACCCAGT CTGCTATCAG CCATCAGATT CGCGAGCTTG AAGAGTATTT TGGTAAACCA
TTGTTTTTGC GTCAGAACCG CAGAGTAGAA CCAACGGCAG AGGGACGACG ACTACTAGAT
TCACTCTCAA GAGTATTTGA TGTAATTGAA GCGGCTTGTA ATGAAGTCAC CCTGGCGCCT
AGTTCACAAG TGCTTGCCTT GCATTGTTCG CCTAGTTTTG CGGCAAAGTG GTTAAGCCCA
AGATTGCCCG AATTCATTAA AGATAATCCC GATATCACTA TTCGCCTAAC CTCGGGTGCA
GACTACGTTG ATTTATTGCG TAATCAAGAG ATTGATATTG CAATCTCTTA TCAATTTTCC
CATGAAGGCC CTGGGATTAC CTCTCTCTCC TTGGGAGAAG AAAAAATTGC GCCGCTTTGC
TCACCCGAAA TCATTGACCC CAGTATTCCG GTTGAAGAAT TGATGAGCAA ATTAACGCTT
ATCGAGTCTT CGCTCAATCA CCATAGTTGG GAGCAGTGGT TCGAGATGAA TCACCTCAAG
AATCTTTCTA CTAGAAAAAT CGCCTTTGAT CGTGCGGCTC TCTCGGTATC TGCCGCTGTA
GATGGCATTG GGGTCGTACT GGAAAGCACT CGCTTTGCAG AAAAAGAGAT GTCGCGTGGT
GAATTAGTAG AAATTGGCGC AGGCGTTTTT TTGCCAACGA TGGATAGAAC CCATTTTTTA
TCTTTTAGGT CAAACACCAA GAACAATCAA AAAATTAAGT TATTTAAAGA ATGGATTTGC
GCTAAGGCAG GGGTAGTTAC AGAGTGA
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| Protein sequence | MNINHIYFIY MRKIPNYVLL RAFEAAARLE SFTLAAKELH LTQSAISHQI RELEEYFGKP
LFLRQNRRVE PTAEGRRLLD SLSRVFDVIE AACNEVTLAP SSQVLALHCS PSFAAKWLSP
RLPEFIKDNP DITIRLTSGA DYVDLLRNQE IDIAISYQFS HEGPGITSLS LGEEKIAPLC
SPEIIDPSIP VEELMSKLTL IESSLNHHSW EQWFEMNHLK NLSTRKIAFD RAALSVSAAV
DGIGVVLEST RFAEKEMSRG ELVEIGAGVF LPTMDRTHFL SFRSNTKNNQ KIKLFKEWIC
AKAGVVTE
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