Gene Pnuc_1532 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1532 
Symbol 
ID5053573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp1601289 
End bp1602104 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content46% 
IMG OID640471705 
Producthypothetical protein 
Protein accessionYP_001156310 
Protein GI145589713 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0272744 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAATA AGAAAATTTT TGCTCCAATT CTTACGGTCT GCGCAATTCT CCTGTCTATA 
GGGATCGCTC ATGCCGATGA AAATTTGAGC CCAATCCCAA ATATTTCTGA TCAATGGCGT 
TTTGAGGTCA CCCCTTATGC GTGGTTGCCT ACCATTGGTT CTACCTTAAG TTATAACGAT 
CGTTATGTAA CAACTGCAAG CCTTGATGCC AATAAGGTGC TAAGTAGCTT GAAATCTGGT 
GCAATGATTG CTGGAGAAGC GCACTACGGA AATTGGGGGG TAATGGGGGA TTTCATTACT 
GCAACCCTGC AAAAATCAGG CACCATTCCC ATTACCATTC CGCCAGGTTC GCCGGCAACT 
CTTGCCGATA AAGGCACAGT ACAGTCAACG ATTTTGACTG GTGCAGCCAC TTACACGCTC 
TTTAGAAATC AAAACGCATA TGTTGATGGT TTGGTTGGTG CTCGCTGGGT CGGTATGACC 
GCTACTTTAA ATCTAGCCCT TAATGGAACG GCTGACAAGC TCAGCGATTC CAGTGCTATG 
TCAACAGTGG ATCCTATAGT CGGCTTTAAA GGGCGGTACC GTATAGCTGA CTCTACCTGG 
TATATCCCAA TTTATGGTGA TATTGGTGGT GGAGGGGGTA CAACCAATAT GACCTGGCAG 
GGAATTCTTG GTGTGGGGAA AACTTTTGAG AAATGGTTGG ATGTTTCTCT CGTCTATCGC 
GGCCTGTATT ACGACATGAG GGGTGGCAGC AACAATGGCC TGTTGCAGAA AACGACCTTT 
CAAGGCCCCC AATTGTCTGC AACATTTAAC TTCTAA
 
Protein sequence
MMNKKIFAPI LTVCAILLSI GIAHADENLS PIPNISDQWR FEVTPYAWLP TIGSTLSYND 
RYVTTASLDA NKVLSSLKSG AMIAGEAHYG NWGVMGDFIT ATLQKSGTIP ITIPPGSPAT 
LADKGTVQST ILTGAATYTL FRNQNAYVDG LVGARWVGMT ATLNLALNGT ADKLSDSSAM 
STVDPIVGFK GRYRIADSTW YIPIYGDIGG GGGTTNMTWQ GILGVGKTFE KWLDVSLVYR 
GLYYDMRGGS NNGLLQKTTF QGPQLSATFN F