Gene Pnuc_1480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1480 
Symbol 
ID5052945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp1557351 
End bp1558145 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content44% 
IMG OID640471653 
Producthypothetical protein 
Protein accessionYP_001156258 
Protein GI145589661 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGGAAT TTTTTCAAGA GTCATCGCAA TTTATTATTT CTGGAGCATT GGTAGGCCTA 
TTAGTTGGCA TGACTGGTGT AGGTGGTGGC TCACTCATGA CTCCCTTGCT GACGATTATT 
TTCGGCGTTG CTCCAACTAC GGCAGTTGGA ACCGACCTTG CATTTGCAGC AATTACCAAA 
GGCTTTGGCA CTGTCGCTCA TCGACTTCAT GGAAATGTAC GTTGGGATAT CGTGCGCTTA 
CTCTGCATAG GAAGCCTAAC TACAGCAGTG CTATCTATTC TGGTCCTCAA ATTTGTCGGC 
CCCGTTTCTA AAAGCTTTAA TCATTTAATT AGCCTGTCTA TTGGTGTATC TGTCCTGCTC 
ACAGCGTTCT CTTTGCTGTT TAGAGGAAAG ATATTACATT GGGTTCAACA GAATCCAACT 
TTACTACCGA GTGGATCGAG GCTAAAGGTA GCAACTATTA CTGTGGGTGC TGTAATTGGC 
GTATTAGTAA CCATTTCATC CATTGGTGCA GGTGCTATAG GTGCAACCTT AATTTTGGTT 
CTTTATCCTC ATCTTAAACC TGCACAAGTT GCCGGAACTG ACATCGCATA CGCAGTTCCT 
TTGACAGCAT TAGCTGGTAT AGGTCATTGG TGGCTTGGTA ACGTGCATTT TGATTTGTTA 
TTTGGCTTAT TACTCGGATC CGTTCCAGCG ATCTGGTTGG GAGCTAAACT TTCAAGCACC 
TTATCCGAAC GAACAACCAG GACCACTCTT GCCGCAACAT TATTTTTGGT TGGGATTAAA 
TTAGTTTGCT CATGA
 
Protein sequence
MLEFFQESSQ FIISGALVGL LVGMTGVGGG SLMTPLLTII FGVAPTTAVG TDLAFAAITK 
GFGTVAHRLH GNVRWDIVRL LCIGSLTTAV LSILVLKFVG PVSKSFNHLI SLSIGVSVLL 
TAFSLLFRGK ILHWVQQNPT LLPSGSRLKV ATITVGAVIG VLVTISSIGA GAIGATLILV 
LYPHLKPAQV AGTDIAYAVP LTALAGIGHW WLGNVHFDLL FGLLLGSVPA IWLGAKLSST 
LSERTTRTTL AATLFLVGIK LVCS