| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1477 |
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| Symbol | |
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| ID | 5052089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 1555082 |
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| End bp | 1555627 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640471650 |
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| Product | peptide deformylase |
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| Protein accession | YP_001156255 |
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| Protein GI | 145589658 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAATTC AATCAATCTT ACGTATGGGC GATCCACGCT TACTGGAAAT AGCAAAGCCA
GTAGATCCGA AATTAATCTC GTCTCAACAA ATCCAAACCT TGATCGACGA TTTACTGGAA
ACTATGTACG CCGTGAATGG CGCCGGACTT GCTGCGCCTC AAATTGGAGT CAACCAGCAA
GTAGTGGTTT TTGGCTTTGA TCAAAATCCT CGCTACCCAG ATGCTGAGCA AGTTCCCGAG
ACCATTTTGA TTAATCCCAT CATCACACCG CTAAGTGATA TCAGTATGGA AGATTGGGAA
GGATGTCTTT CAGTACCAGG TTTGCGTGCC AAAGTACCGC GCTACACCAA AATACGCTAT
CAAGGCTTTG ATCGTTACGG CCAATCTATC GACAGAACGG TGGAAGATTT TCATGCTCGG
GTAGTGCGGC ATGAATGTGA TCATTTAATC GGGAAACTAT TTCCAATGCG GGTGAAGGAT
TTCACAAACT TTGGCTTCAC CGATGTTCTC TTTCCAGAAT TACGTGATGC TCCGCCTGCT
GAATAA
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| Protein sequence | MAIQSILRMG DPRLLEIAKP VDPKLISSQQ IQTLIDDLLE TMYAVNGAGL AAPQIGVNQQ
VVVFGFDQNP RYPDAEQVPE TILINPIITP LSDISMEDWE GCLSVPGLRA KVPRYTKIRY
QGFDRYGQSI DRTVEDFHAR VVRHECDHLI GKLFPMRVKD FTNFGFTDVL FPELRDAPPA
E
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