| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1466 |
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| Symbol | |
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| ID | 5053863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1543491 |
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| End bp | 1544327 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640471639 |
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| Product | TatD-related deoxyribonuclease |
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| Protein accession | YP_001156244 |
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| Protein GI | 145589647 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.876594 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGGATAG ATACTCATTG CCATTTAGAT GCACCTGAGT TTGCGCCGAA TTTACCTGCA
GTGATTGCTG CTGCCAAAGA ACGGAATGTC AAAGCCATCC TGCTGCCTAC CGTAAGAGCT
GCTGACTGTC AGCACGTTAA GGCGCTTGCC GCTTTGTATG GGAATGAGAT CCCAGGCTTG
GTATATACCT TGGGCATTCA TCCTTTATAT AGCGCTCAAG CTAATGAAAG TGATCTCGAG
ATTATTGAAC AACAAGTTCA ACAGTCATTA TCTGACTCTC GATTTGTTGG AATTGGTGAG
ATAGGCTTAG ATTATTTTGT TGAAGGCTTA GATCCACATC ATCAGGAGTG GTTGTTTCAT
GCCCAGCTAG ATTTGGCTGA AAAATATCAG CTTCCAGTCA TCTTGCATGT TCGTCGCTCA
CAAGATGCCA CACTAAAAGC CTTACGTCGT CGAAAAATGA ATGGGGGCAT TGCCCATGCA
TTTAATGGCA GCTTTCAGCA AGCCGAGCAA TTTATAGAAC TTGGATTTAA GTTGGGATTT
GGTGGGGCAG CCACTTATCA GCGCGCTTTA CAGATTCGCA GATTGCTATC TGATTTGCCT
CTTGAATCCA TTGTTACTGA AACAGATTCT CCGGATATAC CTCCTGCATG GTCAAAAGAA
GAAGGGTTGT CGTTCAATGA GCCAGCCTTC TTGCCGCGTA TTGCACATGA GTTAGCTGCA
ATTCGGGGGA TTAGTCCTGA AGATTTTTCT GAAGCTGTTT GGCGCAATGC CATGAAAGTA
TTGCCGCGTT GGTTAGCGCT GTGTTCTGCT AACCCAGAAC TACCCCTAGC TTCTTAA
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| Protein sequence | MWIDTHCHLD APEFAPNLPA VIAAAKERNV KAILLPTVRA ADCQHVKALA ALYGNEIPGL
VYTLGIHPLY SAQANESDLE IIEQQVQQSL SDSRFVGIGE IGLDYFVEGL DPHHQEWLFH
AQLDLAEKYQ LPVILHVRRS QDATLKALRR RKMNGGIAHA FNGSFQQAEQ FIELGFKLGF
GGAATYQRAL QIRRLLSDLP LESIVTETDS PDIPPAWSKE EGLSFNEPAF LPRIAHELAA
IRGISPEDFS EAVWRNAMKV LPRWLALCSA NPELPLAS
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