Gene Pnuc_1410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1410 
Symbol 
ID5052592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp1481785 
End bp1482828 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content47% 
IMG OID640471582 
Producthypothetical protein 
Protein accessionYP_001156188 
Protein GI145589591 
COG category 
COG ID 
TIGRFAM ID[TIGR00374] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.92034 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTCAC CAGCCCATTC CACCCCAAAA TCCCCTTCCG GGTGGAAATC AATTCTCAAG 
CGCGCCTGGC CGTACATCCG CATCCTGCTA TCAATTGCCC TGCTTTGGAA AGCGACTAGC 
GGCATTGACT GGACCACATT GTTTGATTCC CATATCAAAA TGCAGCCACT TTGGTTTTTA 
GCAGCTTTAG CGACCATGAC GCTTGCTTTT ATTTGCGGCG GCTATCGCTG GGGTTTATTT 
ATGCAGACTG TAGGCTTTCC TCGTCGCATC TTCTCTTATA TTGCCTTGTA CTTTACCGGG 
GGGCTCATCA ATCAAGGTCT ACCAAGTACT CTAGGGGGAG ATAGTTATCG CGCCATTACA 
GCAACTCACT TGACTACTAA AGGCAATCTC ACCGAAACAA CAGAGTTGGA TAAAGAGCTG 
CATCACTCTG TTGACCTTGA GCATGCCAAT CCAAAATTAC GCCTGAGTTT TTCCATGGTT 
GTAGTAGATC GATTATTAGG ATTGGCTGGT AATAATTTAC TGGGTGGTAT CGGCCTGATC 
TTAGGCGGTG CCACGTTGGC TGCATGGGGG CAAGACTTAG GCTATGCAGT AGCCGCAGTA 
ATGCTCTTTG CTGGCGTAGT GATTGCCTTC ATTCTAGCTT GGCAACCCAG TCAAGCGCTT 
TTACAAAAAT TTCTTGTCCG TTTGCGTATG GACAATGCAA TGCCAGGAAT CAAACTTGCA 
TTTGCATGGC CTAACAATAT CGCGCAAGCT CTCTTGGCCA TTGGCATTCA CCTTTTGACC 
ATCCTCACAT TGATGTTCTG CTTAAAAGCG TACGGCGTGG ATGCGCCTAT TGAAGGCCTA 
ATGATTGGCT TACCCGCGCT GAGTCTGCTG CTGATGTTGC CCATTAGTAT TTCTGGTTGG 
GGCTTACGTG AAGCAACCCT ATCTTCCGTA CTAGCACTGT GGGGGGTTAA TCCTTCGCTC 
ACCGTGTTAG CTTCTATTAG TTACGGCGCT ATTACGGTGA TTTCAGTATT GCCGGGTGCA 
TACTACTTAT TAAAACGAAA ATAA
 
Protein sequence
MSSPAHSTPK SPSGWKSILK RAWPYIRILL SIALLWKATS GIDWTTLFDS HIKMQPLWFL 
AALATMTLAF ICGGYRWGLF MQTVGFPRRI FSYIALYFTG GLINQGLPST LGGDSYRAIT 
ATHLTTKGNL TETTELDKEL HHSVDLEHAN PKLRLSFSMV VVDRLLGLAG NNLLGGIGLI 
LGGATLAAWG QDLGYAVAAV MLFAGVVIAF ILAWQPSQAL LQKFLVRLRM DNAMPGIKLA 
FAWPNNIAQA LLAIGIHLLT ILTLMFCLKA YGVDAPIEGL MIGLPALSLL LMLPISISGW 
GLREATLSSV LALWGVNPSL TVLASISYGA ITVISVLPGA YYLLKRK