Gene Pnuc_1402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1402 
Symbol 
ID5052402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp1473336 
End bp1473869 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content46% 
IMG OID640471574 
Producthypothetical protein 
Protein accessionYP_001156180 
Protein GI145589583 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCTTTG CAGTATTGAT GCGTAAACAA AACATCGATA ATCCATGGAT ATCTTATCGC 
TGGGTTCCGC AGGAGGTGTT GCCTGATTTT GGTCAATTTA ATAGCACTGC TGATAATTCG 
ATCTCGGGCA AATTCTTGGA GCGAGATGAA GATGGCGAAT CTTGGCTATT TACTGGCTAT 
GAGTTAAATC TTTTTCCTGA TGAGGCAGAG GGCTACTATC TCAATATCTC TGCAACGACT 
CCCTGTTGGT TTGTGATGTG GCGACTAGAG GAAGATATGG AGCGCTATAT AGACTCACAA 
TCCCTCCCTC TAGCAAGGTC TGAAGTAACC ATAGCTGTTC CTCATCGTAT TTGTGTCAGT 
TATAACGAGG CAGGTCGACT TCTTGATGGG GGAGAGTCAG TAGATACTGT GACGATGTCT 
GCAGAACACG CCTCTTGGTT GGAAGAGTAT GTCAGCGAGA ATTATCGTCC TGAGCCTAAA 
AAGAGGCATC GACCTGCATC ATTTAAGGGT GCTGAGCGCA CAGCGGAGGA CTGA
 
Protein sequence
MRFAVLMRKQ NIDNPWISYR WVPQEVLPDF GQFNSTADNS ISGKFLERDE DGESWLFTGY 
ELNLFPDEAE GYYLNISATT PCWFVMWRLE EDMERYIDSQ SLPLARSEVT IAVPHRICVS 
YNEAGRLLDG GESVDTVTMS AEHASWLEEY VSENYRPEPK KRHRPASFKG AERTAED