Gene Pnuc_1376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1376 
Symbol 
ID5052678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp1447105 
End bp1447590 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content46% 
IMG OID640471548 
Productrubrerythrin 
Protein accessionYP_001156154 
Protein GI145589557 
COG category[C] Energy production and conversion 
COG ID[COG1592] Rubrerythrin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.642256 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACGCC CAGAAATTAA AACTATCCAA AATCTAGAAT CTGCTTTTGC CGGTGAATCT 
ATGGCCCATA TTAAGTATCG CTATTTCGCC AAGTTGGCGC GCGCTGCTGG GGATGAAGAA 
ACAGCAAAGA TTTTTGAAGC CACTGCCGAT CAAGAGGTTA TGCATGCTTT TGGGCACTTA 
GATCTGCTTT ATCCAGCCAG CTCTATCACA CCAACACGTG CATTGGAAAT TGCGATCGAA 
GGTGAAACCT ATGAATATAC GGAAATGTAT CCCTCCTTCC GCAAAACTGC AGTGGACGAA 
GGGAATACGG CCGCTATTCA AGAAATTGAT GAGCAAATTG CCGAATCCAA AGAGCATGCG 
GAGCAATTTC AGGCGGTATT AGCAAAAGCA GCGAAACGTT TTGCAGCCTT AGCCAATGTC 
GAAGAGCGGC ATGCAAACCA TTACAAACAG GCTCTGGAAA AAGCAAAGGT TCATGCAGCC 
CAATAA
 
Protein sequence
MARPEIKTIQ NLESAFAGES MAHIKYRYFA KLARAAGDEE TAKIFEATAD QEVMHAFGHL 
DLLYPASSIT PTRALEIAIE GETYEYTEMY PSFRKTAVDE GNTAAIQEID EQIAESKEHA 
EQFQAVLAKA AKRFAALANV EERHANHYKQ ALEKAKVHAA Q