Gene Pnuc_1374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1374 
Symbol 
ID5053648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp1444837 
End bp1445937 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content47% 
IMG OID640471546 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_001156152 
Protein GI145589555 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGGTA AAGAAATCAT GTTCACTCCA GTTAACCTGG GATCGCTTCA ACTAAAGAAC 
CGCCTCGTAA TGGCGCCTCT TACTCGAATG CGCGCTGTTG CTGGTGATGT GCCAAACCCA
TTAGCCAAAA CGTACTATGG GCAACGAGCT AGTGCTGGAC TCATTATTAC CGAGGCAACT
CAAATTTCTC CGCTCGGCAT GGGCTATCCA GCGACGCCTG GAATTTATTC TCCAGAACAA
ACTGCTGCCT GGAAGGAAAT CGTAGAGGCA GTCCACGCTA AGGGTGGAAC GATTGTTGCG
CAGCTGTGGC ATGTAGGTCG TATTTCTCAT TCATCATTGC ACCCAGAAGA TGGGGTACCT
GAAGCGCCAT CAGCGATAGC TGCAGCCGGC CAGACATATG GCGCCGATTG GAAGCTCCAT
GACTATGAAG TTCCTAAAGC GATGAGTTTG GATGATATTG TTCGTCTTTT AAAAGAGTTT
GAGCTTGCTG CTCGCAATGC TAAAGCAGCT GGCTTTGATG GTATTGAAAT TCACTCTGCT
AATGGATATT TGCTGGATCA ATTTTTGCAA GATAAAACCA ATCAGCGCAA TGATCAATAT
GGTGGATCCA TCGAAAATCG CTTACGTTTA CTAGGCGAAG TCATTGAGGC TGTCAGTAAG
GTATTTACAA GCGATCGAGT AGGGGTGCGT TTATCGCCTT ATGGTACCTT CAACGATATG
TCTGATAGTG ATCCAGTTGC CTTATTTACT GCAGCAATTA ACAAGTTAAA CGCTTATGGT
TTGGCATATG TACATATGAT TGAGCCTAGG GCAACCAGTG CTGGCGGTGG CGAGCAAGTG
AACGAAGGTG CACCCATTAC TTCAGAGTTA TTTCGCAAAG CCTATCAAGG TAAATTTATT
ACTGCAGGTG GTTACGACCA GGCCATGGGC GAGAAAGTGC TGGAAGAGGG AATGGCCGAT
GCAGTAGCTT ACGGACGCTT GTACATCTCT AACCCAGACC TACTCGAGCG CTTTGAGAAA
AACGCCCCAT TAAATCCTTA TAACCGAGCT ACTTTTTATG GTGGTGCTGA GGTGGGCTAT
ACAGATTACC CAAGCCTATA A
 
Protein sequence
MSGKEIMFTP VNLGSLQLKN RLVMAPLTRM RAVAGDVPNP LAKTYYGQRA SAGLIITEAT 
QISPLGMGYP ATPGIYSPEQ TAAWKEIVEA VHAKGGTIVA QLWHVGRISH SSLHPEDGVP
EAPSAIAAAG QTYGADWKLH DYEVPKAMSL DDIVRLLKEF ELAARNAKAA GFDGIEIHSA
NGYLLDQFLQ DKTNQRNDQY GGSIENRLRL LGEVIEAVSK VFTSDRVGVR LSPYGTFNDM
SDSDPVALFT AAINKLNAYG LAYVHMIEPR ATSAGGGEQV NEGAPITSEL FRKAYQGKFI
TAGGYDQAMG EKVLEEGMAD AVAYGRLYIS NPDLLERFEK NAPLNPYNRA TFYGGAEVGY
TDYPSL