Gene Pnuc_1372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1372 
Symbol 
ID5053375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp1443094 
End bp1443765 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content44% 
IMG OID640471544 
Producthypothetical protein 
Protein accessionYP_001156150 
Protein GI145589553 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.515412 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGGAATCA TCCAAACCGC TACGCTGACT CTACTTGGCT TAATCATTGG ATTCACCTTC 
TCGATGGCCA TTGAGCGCTA TGACGATAGA AAGGTGTTGG AAGAAGCTGA GGCTAACGCT 
ATTGGCACGG AATACCTCAG GGCCGATTTG CTCCCAAGTA AAACTGCCAA GCAAACCAAA 
GACCTGCTAG AACAATATCT CGAGCAACGC ATTCTGTTTT ACAGCAAACA AGACCCGGAA 
AAAGTTCAAG AGATACGTCA AAATACAAAT GACTTACAAC AGGCGTTATG GGATGGAATT 
CTTCCAGAGG CTCAAAAGCA ACAGACCCCA ATCATCGCTC TAGTTGTATC AGGCATGAAT 
GATGTCATTA ACTCTCAGGG ATACACGCAG GCATCCTGGT GGAATCGTAT CCCACAGCCC 
GCATGGACAC TGATGATGGC CATTGCTATC TGCGCCAATT TGTTAGTTGG TTATGGGGCC 
AGAAATTTTA AGAAGAATAT TGGGCTCTTT CTCATGTTTC CCTTTGTTAT CTCCGTATCT 
TTCTTCTTAA TAGCGGATAT TGATAGTCCA AGAGGCGGCA TTATTCGCAT AAAACCCCGT 
AATCTATTGG TTCTGCAAGA ATCATTAAGC CAGAAGACTC CTTCTTTAGC GCCATCTGCT 
AAAGCCAATT AA
 
Protein sequence
MGIIQTATLT LLGLIIGFTF SMAIERYDDR KVLEEAEANA IGTEYLRADL LPSKTAKQTK 
DLLEQYLEQR ILFYSKQDPE KVQEIRQNTN DLQQALWDGI LPEAQKQQTP IIALVVSGMN 
DVINSQGYTQ ASWWNRIPQP AWTLMMAIAI CANLLVGYGA RNFKKNIGLF LMFPFVISVS 
FFLIADIDSP RGGIIRIKPR NLLVLQESLS QKTPSLAPSA KAN