Gene Pnuc_1338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1338 
Symbol 
ID5052379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp1415535 
End bp1416116 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content40% 
IMG OID640471510 
Producthypothetical protein 
Protein accessionYP_001156116 
Protein GI145589519 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAGAAAT CTTTACTCGC TGGTTTATTC GCCGTTATTG GCCTTTCTTT TGCTGTTTCA 
GCATTTGCTC AAATGCCTGC AAAAATGTTG CCTTTAGCTG CTGAAGTAGT TGTATTGTCT 
GCAACTGTTG ACTCTGTTGA CGTTAAAAAA CGTACTGTTG TATTGAAAGA TGCAAACGGT 
AATTTGGCGC AAATGAACGT TGCTAAATCA GTAAATGATT TGGACAAAGT TAAAAAAGGT 
GACGTATTTT TGGTTGAAAA CGCACAAGCG ATTGCAGTTG GTCTGACTGC TGCTCCTAAA 
GGTGCTAAGC CAGGTGTTTC TGGTGTTCGC TCTGTAGTGC TTGCTGGCAA AGGCGCTGCT 
AAGCCATTTG AAGAAGTTAC TGAAACTGTT TACGCATCCG TAAAAATCGA TACGATTGAT 
ACAAAAACAC GTCTTGTAAC ATTTACATTA CCAAGCGGCG AGAAACAAAA AGTTAAAGTT 
GACCCAAGCG TTCTCGGTCT TGAGAAATTC AAAGTTGGTG ATGACGTAAT CGTTGAGTAT 
GTTGACGATA CTGTTATCGG CTTTGCAACT CCTAAGAAGT AA
 
Protein sequence
MKKSLLAGLF AVIGLSFAVS AFAQMPAKML PLAAEVVVLS ATVDSVDVKK RTVVLKDANG 
NLAQMNVAKS VNDLDKVKKG DVFLVENAQA IAVGLTAAPK GAKPGVSGVR SVVLAGKGAA 
KPFEEVTETV YASVKIDTID TKTRLVTFTL PSGEKQKVKV DPSVLGLEKF KVGDDVIVEY 
VDDTVIGFAT PKK