| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1324 |
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| Symbol | |
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| ID | 5053233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1401648 |
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| End bp | 1402370 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640471496 |
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| Product | haloacid dehalogenase, type II |
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| Protein accession | YP_001156102 |
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| Protein GI | 145589505 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01428] 2-haloalkanoic acid dehalogenase, type II
[TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATACAA ATTTACTTTC TAACAAACTA CTTCCTAAGG TACTCGCATT TGATGTCTTT
GGAACGGTAG TCGATTGGCA TGGCTCGATT GCTGCTGAAG TAGCTCGCTT AAAAATACCA
GTTGATCCTA ATGTATTTGC GAGCGCCTGG CGAAATGGTT ATAAGCCTGC TATGGCTAGA
GTGCGCTCAG GCGAATTGGG TTGGACCAAG ATAGATGATT TGCATAGGCT AATTCTTGAC
CAAGTTCTCG ATCAATTTAG CATTCATTCG CTCAACGAAG CTCAAAAAGT TGATCTCAAT
TTGGTTTGGC ACCGCTTGCA GCCATGGTCA GACTCAGTTG AAGGCTTGTG TAAGCTTAAG
CAACATTTCA CGATTGTGAC TCTGTCGAAT GGCAATTTAA GTCTCTTGGC CAATATGGCT
AAGAACGCAG GCTTACCTTG GGATTTGATT CTATCTGCCG AAGTCTTCCG GCATTACAAG
CCTGACCCTG AAACCTATTT GGGGGTGGCT GCTACATTTG ATGTAAAGCC AGGAGAAGTG
ATGCTAGTTG CTGCACATAA GGATGATTTA GTGGCAGCCC ATGCCTTGGG ATTACAAACT
GCCTTTATAG AGCGCCCCAA AGAGTTTGGA CCCACCCATC AACGTGATGA CATGCATCGA
GAAGATTGGG TGGATTACCA TGCGAGCGAT TTTAAAGATC TTGCTAAGCA GTTATCTCTC
TAA
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| Protein sequence | MHTNLLSNKL LPKVLAFDVF GTVVDWHGSI AAEVARLKIP VDPNVFASAW RNGYKPAMAR
VRSGELGWTK IDDLHRLILD QVLDQFSIHS LNEAQKVDLN LVWHRLQPWS DSVEGLCKLK
QHFTIVTLSN GNLSLLANMA KNAGLPWDLI LSAEVFRHYK PDPETYLGVA ATFDVKPGEV
MLVAAHKDDL VAAHALGLQT AFIERPKEFG PTHQRDDMHR EDWVDYHASD FKDLAKQLSL
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