| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1319 |
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| Symbol | |
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| ID | 5053888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1397885 |
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| End bp | 1398442 |
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| Gene Length | 558 bp |
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| Protein Length | 185 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640471491 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_001156097 |
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| Protein GI | 145589500 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.537243 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTATTT CTAAAGTCCC TTATAGAGTC GCCTTGGTTT TCTTCGGGGG ATTTCTCATC
CTCAGTAGCA CCTTGGCTAA GGCTTCTTAT ATAGAGAAGT GCTTGCGCAA TGAGCAGCCT
GATCGGCATT GCGCACAAAT ACAAGCCAAT ATGGAGCGCT GGACTGATAG CATTAATGAA
GCTGCGGATA AAGTTAGCAT TGATCCTTTA TTACTAAAAG CAGTAGTCGG TATTGAGTCT
CACTTTAATG ACAGCGCCCA CTCACGTTCA GGCCCTGTCG GGCTGGTCCA AATATTACCG
GCCACCGCAT CCAAGTTAGG GTTCAGCAAA GAGCAACTCA AAAATCCAGA GATGAATCTA
GAGGCGGGGG CTACTTATCT CAAGGTACAA GAAGCCCAAT TTCATGATAA TTATTTGGCA
GTTGTAGCTT ACAACTTAGG TGGAAGAACA ACATCTCCAA ATAAGAGGGC TCAGCACCAT
GCTCATGCCT ATGCCAAAGA AGTGATGTCT CTCTTTGACT ATTTCCAATC ACAAGGAAAT
GGCAATCCAG CTAACTAA
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| Protein sequence | MIISKVPYRV ALVFFGGFLI LSSTLAKASY IEKCLRNEQP DRHCAQIQAN MERWTDSINE
AADKVSIDPL LLKAVVGIES HFNDSAHSRS GPVGLVQILP ATASKLGFSK EQLKNPEMNL
EAGATYLKVQ EAQFHDNYLA VVAYNLGGRT TSPNKRAQHH AHAYAKEVMS LFDYFQSQGN
GNPAN
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