| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1302 |
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| Symbol | |
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| ID | 5052208 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1375744 |
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| End bp | 1377261 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640471474 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_001156080 |
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| Protein GI | 145589483 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTGATTC TCGGCATACG TAAAATTAGC GCATTATTTC CAATCAAAAG ACTCGCTTTT
GCTCTATGCG CTTCTTCTTT TTCTGCCGCA GTTTTTTCAC AAGTCGGCGA AATTCCCCCT
GCAAAGGTCA CCGTTCAGGG TGGTGATACT TCCTTAGCTG TGCCGCCATC GATTGGGTCT
CAACTGAGCT CGCAAGAGCA ACCAAGTAAA GCATCAGAAT TGTTTGCGCC AGTAACTAAG
GCCAATACGC CGAAAATTTA TACCAAGCCA GCTGCTTCAG GCCCTGCTGA AATGGATTTA
CGTCAACTGT GGAATGAGCT GAAAATAAAT AACCCCCAGC TTTCCTCTTT GCGCGAATCT
TATTTGGCAG CAAAAGCAAC AGTGCCGCAA ATTGCTGCGC CGGCTAATCC GCAAATTGGT
TTAGTGTGGT CAGGCATGCC AGTAAATTCC CCATTTGCAC TAGGCGGAGC CAATGCGCCT
TCTACTCAGT ACCCTAATGG CATTAGTAGT AACAATGCAA TTTCTATTGC CCAACCATTT
CAGTTTCCTG GCAAAAAGAG TCTGGCGGCA GACATTGCCA ACACCAATGC TGATGCATTA
TTAGCGCAGT CAGAAGTTGC ATACCTGCAA TTGGGCGCGC AACTCTCCAG TCTTTACTAC
AACGCTCTAG CGGCGCAAAA GCAATTGCAA GTTTTAAAAG AGTCTGTGAT TCGCCTGGAG
ATGATTAAGA ATGTCGCAAA AGCACGCTAC GCAAACAATG CTGCTGCTTA CGTTGAGTAT
TTAAATGCGC AGGTTGCTCA AAGTGCTGCT GAAGCAGATC AATTTAATTT AGAGCGTCAA
TTGCAGGTTT CGATAAACAA TATCAATACT TTAGTTGGTC GTCATTCTCG TGAAAAATTG
GTGCTGCGTG CAGATGTGAA TCGTGCTTTA ACTAAAGTGC CAACATTAGT TGAGCTGGAA
GATTATGCCG AAAGCAGTCA TCCGGCTTTA AAGAGTTCTG CCTTACAGCT TGAAGCTGCA
CGTAAAGGTG TGGACTTAGC AAAGAAAGCC TACTTGCCGG ACTTCCAGGT GATTGGATCT
TCTTATACTC CGCGCGGCCC TTTCTCGGCG AATAACGGCG CACTATTCTA TCAATTTGAG
TTAGATCTCA TTATTCCTTT GTACTTTTTT ACTAAAGAAA AGTACGGCGT TGAGCAAGCG
CAGCGCAATC AAGCCTCTGC AGAAGCTGGC GATATCTCCA ATAGGCAGCA AATCGTCTTG
GCAGTGAACA CTGCATATGC AGCTTATGAG CAAGCCAAAA GGCAAACTCA ATTCTTGAGG
GAGCGCCAGG TACCTCAAGG TGACGCCGCC TATAAAGTAG GCCTAATTCA GTATTCAAAT
AATGGTCAAG GATTTAATGA TTTATTGACA GCCCAAACCC AGTTGCGTAG CTTGGAAGTG
CAATTGGCTT TGGCGGAAGC AAATCTCATG CAGGCAGAAG CAGTATTGCT CGTGACTGCT
GGCAAAGAGC CTTATTAA
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| Protein sequence | MLILGIRKIS ALFPIKRLAF ALCASSFSAA VFSQVGEIPP AKVTVQGGDT SLAVPPSIGS
QLSSQEQPSK ASELFAPVTK ANTPKIYTKP AASGPAEMDL RQLWNELKIN NPQLSSLRES
YLAAKATVPQ IAAPANPQIG LVWSGMPVNS PFALGGANAP STQYPNGISS NNAISIAQPF
QFPGKKSLAA DIANTNADAL LAQSEVAYLQ LGAQLSSLYY NALAAQKQLQ VLKESVIRLE
MIKNVAKARY ANNAAAYVEY LNAQVAQSAA EADQFNLERQ LQVSINNINT LVGRHSREKL
VLRADVNRAL TKVPTLVELE DYAESSHPAL KSSALQLEAA RKGVDLAKKA YLPDFQVIGS
SYTPRGPFSA NNGALFYQFE LDLIIPLYFF TKEKYGVEQA QRNQASAEAG DISNRQQIVL
AVNTAYAAYE QAKRQTQFLR ERQVPQGDAA YKVGLIQYSN NGQGFNDLLT AQTQLRSLEV
QLALAEANLM QAEAVLLVTA GKEPY
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