Gene Pnuc_1241 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1241 
Symbol 
ID5053215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp1305340 
End bp1306224 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content47% 
IMG OID640471413 
Producthypothetical protein 
Protein accessionYP_001156020 
Protein GI145589423 
COG category[S] Function unknown 
COG ID[COG3777] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.271963 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGTTA TGCGAATCGA ACCTCAAACC ATCACCCATC TTCAAGAGTG GCTTGGTAAA 
ACAGAATCCC TTTCTGATAC CGTCACCGCT GCACCAGTAC GTGCTTTATC AGCCACCTTG 
GATCGCGTCG ACCCAGAGCC AAGCAAAGGA ACTTTTTTAC CTGAGCTATG GCATTGGCTC 
TATTTTTTAC CGCATGCACG AGAATCCGAT ATTGGCCCCG ATGGCCATCC TAAACGTGGT 
GGATTTTTGC CTCCGGTTCC ACTACCGCGT CGCATGTGGG CAGGCAGTCG TATTAAATGG 
CTTGCGCCAC TTTCCGTGGG TGATGAGATT GAGCGAGTGT CAACCATTCA ATCGGTTACT 
CATAAAGCGG GTCGAACCGG CGACTTAATT TTTGTCCTAG TTAAACATGA CATCTCCAAT 
CAGAATGGTT TGGCTATTAC TGAAGAGCAT GACATTGTGT ATCGTGATGC ACCAGAACCA 
GATGACAAGC CTGTCGCCCC TACTCCTGCA CCAAGCGATG CCGCATGGAC AAAGACCATC 
ACACCAGATG ACGTTTTACT CTTTCGTTAT TCAGCATTAA CGTTTAATGG CCATCGTATT 
CATTACGATC GTAAATACGT CACAGAAGTT GAAGGCTATC CCGGTTTAAT TGTGCATGGA 
CCTCTCATTG CCACACTCTT AGTGGACTTG GTGCGGCAAA GTATTCCCGA CTCTAAGCTG 
AAAAGTTTTG AGTTCCGCGC CATTCGCCCT ACTTTCGATA TCAATATCTT TAAAGTTAGC 
GCCAAACCTG ATTTAGAAAA AGACCTTTCA GGTAAAACCA TTTCAATCTG GGCACAAGAT 
CATGAAGGCT GGCTAACAAT GCAGGCTAGT GCAGTGCTAG CCTAA
 
Protein sequence
MEVMRIEPQT ITHLQEWLGK TESLSDTVTA APVRALSATL DRVDPEPSKG TFLPELWHWL 
YFLPHARESD IGPDGHPKRG GFLPPVPLPR RMWAGSRIKW LAPLSVGDEI ERVSTIQSVT 
HKAGRTGDLI FVLVKHDISN QNGLAITEEH DIVYRDAPEP DDKPVAPTPA PSDAAWTKTI 
TPDDVLLFRY SALTFNGHRI HYDRKYVTEV EGYPGLIVHG PLIATLLVDL VRQSIPDSKL 
KSFEFRAIRP TFDINIFKVS AKPDLEKDLS GKTISIWAQD HEGWLTMQAS AVLA