| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1227 |
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| Symbol | infB |
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| ID | 5052887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1287154 |
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| End bp | 1289916 |
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| Gene Length | 2763 bp |
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| Protein Length | 920 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640471399 |
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| Product | translation initiation factor IF-2 |
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| Protein accession | YP_001156006 |
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| Protein GI | 145589409 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00487] translation initiation factor IF-2 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0619631 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAACAA CAGTAAAAGT ACTCGCTAAA GAATTAAAAC GTACCGCGCC AGACCTCTTA
GAGCAGTTGA AGGCGGCCGG TATCGAAAAA GGTTCTGAGG ACGATAGCAT TACCGAAAAG
GACAAAACTG TTCTGCTCGA GCATTTGCAA AAAGAACATG GCAGCGCTGA GACTGGCGCA
CGTAAGAAGA TCACCTTAAT TAAGCGTGAG AATTCTGAAA TTCGTCAGGC AGATTCTGCT
GGTCGTACAC GAACCGTGCA GGTAGAAGTG CGTAAAAAAC GCGTGCTTGT GAAGCGTAGT
GATGAGGCAG CGGCTCTAGA AGTAGAAGAG GCGCCGGCAA AAGTAATTGC ACCTACAGAG
CCAGTGAAAT CTATTCTCTC TGCTGAGGAA TTAGAAAAGC GTGCAGCTGA AGCAACTCGT
CAAGCCGAGT TATTGGCTCG TCAAGAAGCG GAAATGAAAG CGGCTGAAGA AGCGCGTCAA
AAAGAAGTGG CTGCTCCAGT TGTTGAGAAG GAAGAAAAGC CTGTTGACAA TGCTCCTGAC
GCAGCCGCTA CTGCAGCTGA GAAAAAAGCA ACTGCTGATA AGGCTGCTAA AGATTTAGCT
GCTACTAAAG AAAAAGAGTT GGCCGATATT CGTGTACGTC GTGCAGCTGC AGAAGCGGAA
GCTTTGGCAA TTCGCGACAT GATGAGTGCA CCTGCCCGTG TTCTAAAAGC GCCAAGTGAA
ATTGCTGCTG AAGAAGCGAA AAAAGGCACA TTGCATAAGC CAGCAAAACC TGAAGGTGCT
GATGATAAGA AAAAGGCTGT CGCTAAAGTT GGCGGCAAGA CTATCAAGTC TGCTGAAACT
TCATCAACCT GGCAAGAAGA AGGCGCCAAG AAACCTGGTG GTCTGAAGAC TCGCGGTGAT
TCTTCTGGCG GTGTTGGTGG TTGGCGCTCA GGCGGTGGTC GCAAGAAGCA ACGTCAAATT
GCTGAGGCCA ATGTCGATAC TAATTTCCAA GTCCCAACTG AACCGGTGGT TCGTGATGTT
CATGTTCCAG AAACCATTAC TGTTGCTGAG TTAGCTCATG CAATGGCAGT GAAGAGTGCG
GAAGTAATTA AGTTATTGAT GGGCATGGGT CAGATGGTTA CCATCAACCA AGTGCTCGAT
CAAGATACAG CGATGATCAT CGTAGAAGAG ATGGGCCATA CAGCCCACGC TGCTAAGTTA
GATGATCCTG ATTTAGATCT GGGTACTGAT GGTCATGATG CAGAGTTATT GCCACGTCCT
CCTGTAGTTA CTGTCATGGG TCACGTTGAC CACGGTAAAA CTTCGCTGCT CGACAAAATT
CGCGCAGCTA AAGTTGCTAC AGGCGAAGCT GGCGGTATTA CTCAGCACAT CGGCGCTTAC
CATGTGGAAA CACCTCGCGG CATGATTACC TTCCTGGATA CTCCAGGTCA CGAAGCCTTT
ACGGCAATGC GTGCTCGTGG TGCGAAGGCA ACCGATATTG TGATCTTAGT AGTTGCAGCC
GATGATGGTG TGATGCCGCA AACTAAAGAG GCGATTCATC ATGCATTAGC TGGTGGCGTA
CCTATTGTTG TGGCAATCAA TAAGATTGAT AAGCCTGAAG CCAACTCTGA GCGCGTGAAA
ACAGAATTAG TCGCTGAGCA AGTCGTTCCT GAAGAATACG GTGGCGATGT GCCATTCATT
CCCGTATCTG CAAAAACTGG CGAAGGCATT GATGCTTTGT TAGAAAACGT ATTGTTGCAG
GCGGAAATTT TGGAGCTGAA AGCGGCTAAA GATGCGCCTG CACAAGGTTT GGTGATCGAA
GCCCGTTTAG ATAAGGGTAA GGGTCCTGTT GCAACCATAT TGGTTCAGTC AGGCACGCTC
AAGCGCGGCG ATATGTTGCT AGCGGGTTCA ACCTATGGTC GTGTACGCGC CATGTTGGAT
GAAAATGGCA AGCCATGTAA CGAAGCAGGC CCATCTATTC CGGTAGAGAT TCAAGGTTTG
GGTGATGTTC CGGCTGCCGG TGAGTCAGTT CAGGTGGTTC CTGACGAGCG CAAGGCTCGT
GAGATCGCAC TCTTCCGTCA AGGTAAGTTC CGTGATGTGA AGTTGGCTAA ACAGCAAGCA
TTCAAGCTTG AAACCATGAT GGAAAACATG GAAGAGGGCG CTGTTGAAGC TAAATTGTTG
CCTGTGATTA TTAAGGCTGA CGTACAAGGT TCTCAAGAGG CTTTGGCGCA ATCATTAATG
AAACTCTCTA CACCAGAAGT GAAGGTTCAA ATTGTTCACG CAGGTGTTGG TGGCATTACT
GAAACCGACG TGAACTTGGC TGTAGCTTCT AAAGCGGTCA TTTTTGGCTT TAACTCTCGT
GCAGATGCAG CAGCACGTAA GTTGGCCGAG AACAATGGCG TTGACATCCG TTATCACAAC
ATTATTTATG ACGCAGTTGA TGAAGTGAAG TTAGCCTTGA GCGGCATGTT GACTCCAGAT
AAGAAAGAAG AAATCACTGG TCTCGTTGAG ATCCGTCAAG TCTTCTTAGT ATCTAAAGTC
GGCGCAATTG CCGGTTGCTT GGTCGTTGAC GGTATCGTTA AACGTACATC AAGCGTTCGA
CTCTTGCGTG ACAATGTTGT TATCTGGACT GGCGAACTCG ACTCTCTCAA GCGCTTTAAA
GATGATGCTA AAGAAGTTCG CGCCGGTGTT GAGTGCGGCC TGTCATTAAA AGGCTATAAC
GATATTAAAG AAGGTGACCA ACTTGAAGTG TTTGAAGTGA CTGAAGTCGC CCGTTCACTC
TAA
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| Protein sequence | MATTVKVLAK ELKRTAPDLL EQLKAAGIEK GSEDDSITEK DKTVLLEHLQ KEHGSAETGA
RKKITLIKRE NSEIRQADSA GRTRTVQVEV RKKRVLVKRS DEAAALEVEE APAKVIAPTE
PVKSILSAEE LEKRAAEATR QAELLARQEA EMKAAEEARQ KEVAAPVVEK EEKPVDNAPD
AAATAAEKKA TADKAAKDLA ATKEKELADI RVRRAAAEAE ALAIRDMMSA PARVLKAPSE
IAAEEAKKGT LHKPAKPEGA DDKKKAVAKV GGKTIKSAET SSTWQEEGAK KPGGLKTRGD
SSGGVGGWRS GGGRKKQRQI AEANVDTNFQ VPTEPVVRDV HVPETITVAE LAHAMAVKSA
EVIKLLMGMG QMVTINQVLD QDTAMIIVEE MGHTAHAAKL DDPDLDLGTD GHDAELLPRP
PVVTVMGHVD HGKTSLLDKI RAAKVATGEA GGITQHIGAY HVETPRGMIT FLDTPGHEAF
TAMRARGAKA TDIVILVVAA DDGVMPQTKE AIHHALAGGV PIVVAINKID KPEANSERVK
TELVAEQVVP EEYGGDVPFI PVSAKTGEGI DALLENVLLQ AEILELKAAK DAPAQGLVIE
ARLDKGKGPV ATILVQSGTL KRGDMLLAGS TYGRVRAMLD ENGKPCNEAG PSIPVEIQGL
GDVPAAGESV QVVPDERKAR EIALFRQGKF RDVKLAKQQA FKLETMMENM EEGAVEAKLL
PVIIKADVQG SQEALAQSLM KLSTPEVKVQ IVHAGVGGIT ETDVNLAVAS KAVIFGFNSR
ADAAARKLAE NNGVDIRYHN IIYDAVDEVK LALSGMLTPD KKEEITGLVE IRQVFLVSKV
GAIAGCLVVD GIVKRTSSVR LLRDNVVIWT GELDSLKRFK DDAKEVRAGV ECGLSLKGYN
DIKEGDQLEV FEVTEVARSL
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