| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1212 |
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| Symbol | |
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| ID | 5052099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1268496 |
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| End bp | 1269395 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640471384 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001155991 |
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| Protein GI | 145589394 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.415796 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTCA ATTCGGAGGG GGTCTCTGCA TCGCGGGTTT ATCTGCCGGC TGACCAGACT
TATGCGAATT TACTTGAATT TTTTACAAGT CAATTTCCCC ATATAGACCC AAGTGAGTGG
ACCGCACGCT TCGATGAGGG CTTGATCAAA ACGCTAGATG ATCAGCCATT ACTATCAAGT
GATGCTTATC GACCTAACAC TCACCTCATT TATTTCAGGC GTTTAGCAAG AGAGCCAGAG
ATTCCATTTG AAGAAGAGAT TCTTTATCAG GATGAGCATA TTCTTGTGGC AGATAAGCCC
CATTTTCTGC CAGTCACCCC AAGTGGTCTT TACTTGCATC AAACTTTACT AAATCGCTTG
AAGAAAAAAA CTGGTATTCA AACATTAAGC CCAATTCATC GAATTGATCG AGATACTGCC
GGCCTAGTAA TTTTTTCGAT TAACCCATAT GAGCGAGCCA ATTATCAAAA TTTATTTCGT
GATCGTACCG TTACCAAGGT GTATGAGGCA ATTGCACCTT ACTCAAAAGA GCTCGCAAAC
AAGCTGCCAC TGACTTACCG TAGTCGTCTA GAAGAGTCGG AGCACTTTCT ACAGATGCAA
GAAGTGGAGG GCGAGGCCAA TGCTGATACC TATATTGAGC TACTGGAGGC ATCTGAACCC
TGGGCCCGCT ATTGCCTCGG CCCTGGAAGC GGCAAAAAGC ATCAATTGCG CTGCCACCTT
AATGCTTTGG GGGCGCCAAT TAAACATGAT CAAATTTACC CAGTCCTGAC CCCTTATCAG
GAGTACGACC TGGATTTTTC CAAACCATTG CAGCTTTTGG CGAAGGAAAT CGCCTTTAAA
GACCCCATTA GCGGTGAATT TAGGTCATTT ATTTCTAAAA GGGTGTTATT GCCTTTCTAG
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| Protein sequence | MKVNSEGVSA SRVYLPADQT YANLLEFFTS QFPHIDPSEW TARFDEGLIK TLDDQPLLSS
DAYRPNTHLI YFRRLAREPE IPFEEEILYQ DEHILVADKP HFLPVTPSGL YLHQTLLNRL
KKKTGIQTLS PIHRIDRDTA GLVIFSINPY ERANYQNLFR DRTVTKVYEA IAPYSKELAN
KLPLTYRSRL EESEHFLQMQ EVEGEANADT YIELLEASEP WARYCLGPGS GKKHQLRCHL
NALGAPIKHD QIYPVLTPYQ EYDLDFSKPL QLLAKEIAFK DPISGEFRSF ISKRVLLPF
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