| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1200 |
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| Symbol | |
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| ID | 5053304 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1254980 |
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| End bp | 1256122 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640471372 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001155979 |
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| Protein GI | 145589382 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR03408] urea ABC transporter, permease protein UrtC |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.729253 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATATTA AAAAACTTGC CCCTTCTTCA AGCTTTAGCT TAAAGGTTCC TGAGCGGGAA
TCGATTCTTA GTAAGCGCGC TTATATTGCT TTGGCTGCAT TGACGCTTTG TGTATTAATT
GGGGTGCCGA TATTCTCCTT GGTGGTGCCA GAAACAAGTA TGTTTTTTAT GTCTGCCTAT
GCGCTAAGCT TGATTGGTAA GATCATGTGC TTTGCCATTG CGGCATTAGC ACTGGATTTA
GTTTGGGGCT ATTGTGGAAT TTTGAGTTTA GGCCATGGCT TATTTTTTGC CATTGGTGGA
TACATTATGG GTATGTACCT GATGCGTCAG ATTGGCACAG AGGGCGTCTA TAAAAGTGAA
TTGCCTGACT TTATGGTTTT CTTAGACTGG AAAGAATTGC CTTGGTTCTG GAAGGGCAGT
GAGCATTTTG GGTGGATGCT GTTAATGTTA ATTCTGGTGC CGGGTGTTAT TTCCTGGGTG
TTTGGGTATT TTGCCTTTCG CTCAAGAATT AAAGGGGTTT ACTTCTCGAT CATTACTCAG
GCCTTAACGT ACGCTGCCAT GCTTCTTTTC TTCAGAAATG AAACAGGGTT TGGTGGCAAT
AATGGTTTCA CGGACTTTAA GCGGATATTG GGTTACTCCA TCAGTGCCCC AAGCACTCGA
GTCACTCTTT TCATTGTTAC CTTCTTAGTC CTGTTGGGCA GTTTTATTCT TTGCCGAGCC
CTGGTGACCT CAAAAATGGG AAGGGTGATT ACAGCGGTAC GGGATGCAGA ATCTCGTCTG
ATGTTCTGTG GATACAACCC CTTAGGCTAC AAACTCTTTA TTTGGGTTCT ATCTGCCATC
TTATGCGCCA TTGCTGGAGC CTTATTTGTT CCGCAGGTGG GCATCATTAA TCCTGGAGAG
ATGTCTCCTA CCAATTCGAT TGAGATGGCA ATTTGGGTTG CGGTGGGCGG ACGGGGTACT
TTGCTGGGTC CAATTATTGG CGCTTTTGCG GTGAGCGGGG CTAAGAGTTT CTTTACCACT
AACTTTGCAG AATATTGGCT GTTTTTCCTA GGAATGATGT TTGTATTAGT AACCTTATTT
CTGCCAAATG GATTGCTGGG TATCTATCAC AAATTCTTGG TTAAGAAGGG TGGGTCAAAA
TGA
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| Protein sequence | MDIKKLAPSS SFSLKVPERE SILSKRAYIA LAALTLCVLI GVPIFSLVVP ETSMFFMSAY
ALSLIGKIMC FAIAALALDL VWGYCGILSL GHGLFFAIGG YIMGMYLMRQ IGTEGVYKSE
LPDFMVFLDW KELPWFWKGS EHFGWMLLML ILVPGVISWV FGYFAFRSRI KGVYFSIITQ
ALTYAAMLLF FRNETGFGGN NGFTDFKRIL GYSISAPSTR VTLFIVTFLV LLGSFILCRA
LVTSKMGRVI TAVRDAESRL MFCGYNPLGY KLFIWVLSAI LCAIAGALFV PQVGIINPGE
MSPTNSIEMA IWVAVGGRGT LLGPIIGAFA VSGAKSFFTT NFAEYWLFFL GMMFVLVTLF
LPNGLLGIYH KFLVKKGGSK
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