Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_1134 |
Symbol | |
ID | 5053956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | - |
Start bp | 1181388 |
End bp | 1183730 |
Gene Length | 2343 bp |
Protein Length | 780 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640471304 |
Product | EcoEI R domain-containing protein |
Protein accession | YP_001155914 |
Protein GI | 145589317 |
COG category | [V] Defense mechanisms |
COG ID | [COG4096] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.122502 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAAGA AATCCCTTAG CGAACGAGAT ATTTGTACGA AATTCATTAC GCCAGCCATT CTTGGCGCAG GCTGGGATTT GCACACTCAA ATTCGCGAGG AATTAAGTTT TACTAAAGGC CGCATTATTG TTCGCGGCAA GTTACATACC CGCGGAAAGC AAAAGCGCGC AGATTACGTC CTTTATTACA AATCCAATAT TCCCATCGCT GTAATCGAGG CCAAAGAAAA CAACCTCAGT ATTGGCGCAG GAATGCAGCA AGCACTTGAT TATGCGGAAA CGCTTGATGT GCCTTTTGTC TTTAGTTCAA ATGGCGATGC ATTCTTAATG CATGACCGAA CTGGCCTGGC GGATAAAGTA GAGCAAGAGC TTTCTTTAGA TGCATTCCCG TCGCCAGAAG AGCTATGGTC GCGTTATTGC AGATGGAAGG GTGTTGATAC CCCTGAGGCA AAAAATACCG TAGAAATGCC TTATTACGAT GATGGCACTG GGCGCGCTCC CAGGTATTAC CAAGTCAATG CAGTCAACAG AACAATCGAA GCGGTGGCTA ATGGCGCCAA TCGCATTCTG CTGGTAATGG CTACCGGTAC AGGGAAGACG TACACAGCTT TTCAGATCAT CTGGCGCCTA TGGAAGTCTG GAACCAAGAA GCGCATTTTA TTTTTAGCTG ATCGCAATAT CCTGGTAGAT CAAACTAAAA ATAACGACTT CAAGCCATTT GGCGCTGCAA TGACTAAGAT CAGCAAGCGT CAGATTGATA AGAGCTACGA AATTTACTTG TCCCTTTACC AGGCTGTTAC TGGTAACGAT GAAGAAAAGA ATATTTACAA GCAGTTCTCT CCAGACTTCT TTGATTTGAT CGTGATTGAT GAGTGTCATC GCGGTAGCGC CTCTGAAGAT TCAGCTTGGC GTGAGATCTT GGATTACTTT TCTTCTGCCA CACATATTGG CTTAACAGCT ACGCCAAAAG AAACTAAAGA AATATCAAGT ATTACTTACT TTGGTGACCC TGTTTATAGC TACTCACTAA AACAGGGCAT TGAAGATGGT TTCCTTGCCC CTTATAAAGT AATCCGGATT GATATAGATA GGGATCTCCA AGGCTGGAGA CCCAGTGCTG GACAAGTAGA TAAACGTGGT CAATTAATCG AGGATCGCAT CTACAACCAG AACGACATGG ATCGAACCCT GGTCTTAGAA AAGCGTACAG AGCTAGTTGC AAAGAAAATC ACTGAGTTCT TAACGGCTAC TGATCCATTT GCTAAGACTA TCGTATTTTG TGATGACATT GATCACGCAG AGCGCATGCG TCAAGCCTTG GTTAATTTAA ATCCAGAGCG AGTCAAAGAA AATCGTAAAT ACGTTATGCG CATTACCGGT GATGAGCAAG AAGGCAAAGC TGAGCTTGAT AACTTCATTA ACCCAGAAGA ACGTTACCCA GTAATTGCTA CAACCTCTAA GCTAATGACT ACCGGTGTAG ATGCGCAAAC CTGCAAGCTA GTTGTACTTG ATCAACATAT CAAGTCCATG ACTGAATTTA AGCAGATGAT TGGGCGCGGC ACCCGAATTA ACGAAGATTA CGACAAGTAC TGGTTCACCA TCATGGACTT TAAAAAGGCT ACTGAGCTTT TTGCTGATGA AGCATTTGAT GGCCCGCCAA TTGTTATCTA TGAGCCTGGG GTTGATGATC CCCCGGTTCC CCCGGTGGAG CCGCCAACGC CTCCCGGAGT TGAGCCGCCC GTTCCCCCAG AACCCCCTGG CTTTCCTCCT GGACCAGAGG GTGTGAGAGC TAAATACTTT GTGGGTGACG TAGAGGTTCA GGTTATTGCC GAGCGGGTTC AGTATTACGG ACCCGAAGGT AAGTTGATTA CAGAGTCCTT AAAGGACTAC ACCCGTAAAG CAGTACGAAA AGACTATTCA ACGTTGGATC AATTTCTAAA GAGATGGACT TCCGCTGAGC GTAAGGCCGC TGTAATTAAG GAGCTAGAAG AGCATGGTCT TTTACTGGAG GCGTTGGCAA TCGAAGTTAA TAAAGACTGC GATGCTTTTG ATTTAATTTG CCATGTTGCA TTTGATCAGC CTGCACTCAC TCGTAGGGAG CGTGCAGATC AAGTCAAAAA GCGTAACTAT TTCACCAAGT ATGGCGAACA GGCTCGCAAG GTTCTCGAGG CTTTACTTGA AAAATACGCA GATACCGGTA TCGAGAATAT TGACGATATT AAGATTCTGA CCCTAGACCC ATTTAGTAAA ATGGGTACAG CTAGCGAACT TGTATCAGCC TTTGGCGGTA AGCCAGGCTA TATAGCAGCT TTGCATGAGC TAGAAAACCA GCTCTACGCC TAA
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Protein sequence | MSKKSLSERD ICTKFITPAI LGAGWDLHTQ IREELSFTKG RIIVRGKLHT RGKQKRADYV LYYKSNIPIA VIEAKENNLS IGAGMQQALD YAETLDVPFV FSSNGDAFLM HDRTGLADKV EQELSLDAFP SPEELWSRYC RWKGVDTPEA KNTVEMPYYD DGTGRAPRYY QVNAVNRTIE AVANGANRIL LVMATGTGKT YTAFQIIWRL WKSGTKKRIL FLADRNILVD QTKNNDFKPF GAAMTKISKR QIDKSYEIYL SLYQAVTGND EEKNIYKQFS PDFFDLIVID ECHRGSASED SAWREILDYF SSATHIGLTA TPKETKEISS ITYFGDPVYS YSLKQGIEDG FLAPYKVIRI DIDRDLQGWR PSAGQVDKRG QLIEDRIYNQ NDMDRTLVLE KRTELVAKKI TEFLTATDPF AKTIVFCDDI DHAERMRQAL VNLNPERVKE NRKYVMRITG DEQEGKAELD NFINPEERYP VIATTSKLMT TGVDAQTCKL VVLDQHIKSM TEFKQMIGRG TRINEDYDKY WFTIMDFKKA TELFADEAFD GPPIVIYEPG VDDPPVPPVE PPTPPGVEPP VPPEPPGFPP GPEGVRAKYF VGDVEVQVIA ERVQYYGPEG KLITESLKDY TRKAVRKDYS TLDQFLKRWT SAERKAAVIK ELEEHGLLLE ALAIEVNKDC DAFDLICHVA FDQPALTRRE RADQVKKRNY FTKYGEQARK VLEALLEKYA DTGIENIDDI KILTLDPFSK MGTASELVSA FGGKPGYIAA LHELENQLYA
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