| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1134 |
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| Symbol | |
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| ID | 5053956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1181388 |
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| End bp | 1183730 |
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| Gene Length | 2343 bp |
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| Protein Length | 780 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640471304 |
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| Product | EcoEI R domain-containing protein |
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| Protein accession | YP_001155914 |
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| Protein GI | 145589317 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4096] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.122502 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAGA AATCCCTTAG CGAACGAGAT ATTTGTACGA AATTCATTAC GCCAGCCATT
CTTGGCGCAG GCTGGGATTT GCACACTCAA ATTCGCGAGG AATTAAGTTT TACTAAAGGC
CGCATTATTG TTCGCGGCAA GTTACATACC CGCGGAAAGC AAAAGCGCGC AGATTACGTC
CTTTATTACA AATCCAATAT TCCCATCGCT GTAATCGAGG CCAAAGAAAA CAACCTCAGT
ATTGGCGCAG GAATGCAGCA AGCACTTGAT TATGCGGAAA CGCTTGATGT GCCTTTTGTC
TTTAGTTCAA ATGGCGATGC ATTCTTAATG CATGACCGAA CTGGCCTGGC GGATAAAGTA
GAGCAAGAGC TTTCTTTAGA TGCATTCCCG TCGCCAGAAG AGCTATGGTC GCGTTATTGC
AGATGGAAGG GTGTTGATAC CCCTGAGGCA AAAAATACCG TAGAAATGCC TTATTACGAT
GATGGCACTG GGCGCGCTCC CAGGTATTAC CAAGTCAATG CAGTCAACAG AACAATCGAA
GCGGTGGCTA ATGGCGCCAA TCGCATTCTG CTGGTAATGG CTACCGGTAC AGGGAAGACG
TACACAGCTT TTCAGATCAT CTGGCGCCTA TGGAAGTCTG GAACCAAGAA GCGCATTTTA
TTTTTAGCTG ATCGCAATAT CCTGGTAGAT CAAACTAAAA ATAACGACTT CAAGCCATTT
GGCGCTGCAA TGACTAAGAT CAGCAAGCGT CAGATTGATA AGAGCTACGA AATTTACTTG
TCCCTTTACC AGGCTGTTAC TGGTAACGAT GAAGAAAAGA ATATTTACAA GCAGTTCTCT
CCAGACTTCT TTGATTTGAT CGTGATTGAT GAGTGTCATC GCGGTAGCGC CTCTGAAGAT
TCAGCTTGGC GTGAGATCTT GGATTACTTT TCTTCTGCCA CACATATTGG CTTAACAGCT
ACGCCAAAAG AAACTAAAGA AATATCAAGT ATTACTTACT TTGGTGACCC TGTTTATAGC
TACTCACTAA AACAGGGCAT TGAAGATGGT TTCCTTGCCC CTTATAAAGT AATCCGGATT
GATATAGATA GGGATCTCCA AGGCTGGAGA CCCAGTGCTG GACAAGTAGA TAAACGTGGT
CAATTAATCG AGGATCGCAT CTACAACCAG AACGACATGG ATCGAACCCT GGTCTTAGAA
AAGCGTACAG AGCTAGTTGC AAAGAAAATC ACTGAGTTCT TAACGGCTAC TGATCCATTT
GCTAAGACTA TCGTATTTTG TGATGACATT GATCACGCAG AGCGCATGCG TCAAGCCTTG
GTTAATTTAA ATCCAGAGCG AGTCAAAGAA AATCGTAAAT ACGTTATGCG CATTACCGGT
GATGAGCAAG AAGGCAAAGC TGAGCTTGAT AACTTCATTA ACCCAGAAGA ACGTTACCCA
GTAATTGCTA CAACCTCTAA GCTAATGACT ACCGGTGTAG ATGCGCAAAC CTGCAAGCTA
GTTGTACTTG ATCAACATAT CAAGTCCATG ACTGAATTTA AGCAGATGAT TGGGCGCGGC
ACCCGAATTA ACGAAGATTA CGACAAGTAC TGGTTCACCA TCATGGACTT TAAAAAGGCT
ACTGAGCTTT TTGCTGATGA AGCATTTGAT GGCCCGCCAA TTGTTATCTA TGAGCCTGGG
GTTGATGATC CCCCGGTTCC CCCGGTGGAG CCGCCAACGC CTCCCGGAGT TGAGCCGCCC
GTTCCCCCAG AACCCCCTGG CTTTCCTCCT GGACCAGAGG GTGTGAGAGC TAAATACTTT
GTGGGTGACG TAGAGGTTCA GGTTATTGCC GAGCGGGTTC AGTATTACGG ACCCGAAGGT
AAGTTGATTA CAGAGTCCTT AAAGGACTAC ACCCGTAAAG CAGTACGAAA AGACTATTCA
ACGTTGGATC AATTTCTAAA GAGATGGACT TCCGCTGAGC GTAAGGCCGC TGTAATTAAG
GAGCTAGAAG AGCATGGTCT TTTACTGGAG GCGTTGGCAA TCGAAGTTAA TAAAGACTGC
GATGCTTTTG ATTTAATTTG CCATGTTGCA TTTGATCAGC CTGCACTCAC TCGTAGGGAG
CGTGCAGATC AAGTCAAAAA GCGTAACTAT TTCACCAAGT ATGGCGAACA GGCTCGCAAG
GTTCTCGAGG CTTTACTTGA AAAATACGCA GATACCGGTA TCGAGAATAT TGACGATATT
AAGATTCTGA CCCTAGACCC ATTTAGTAAA ATGGGTACAG CTAGCGAACT TGTATCAGCC
TTTGGCGGTA AGCCAGGCTA TATAGCAGCT TTGCATGAGC TAGAAAACCA GCTCTACGCC
TAA
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| Protein sequence | MSKKSLSERD ICTKFITPAI LGAGWDLHTQ IREELSFTKG RIIVRGKLHT RGKQKRADYV
LYYKSNIPIA VIEAKENNLS IGAGMQQALD YAETLDVPFV FSSNGDAFLM HDRTGLADKV
EQELSLDAFP SPEELWSRYC RWKGVDTPEA KNTVEMPYYD DGTGRAPRYY QVNAVNRTIE
AVANGANRIL LVMATGTGKT YTAFQIIWRL WKSGTKKRIL FLADRNILVD QTKNNDFKPF
GAAMTKISKR QIDKSYEIYL SLYQAVTGND EEKNIYKQFS PDFFDLIVID ECHRGSASED
SAWREILDYF SSATHIGLTA TPKETKEISS ITYFGDPVYS YSLKQGIEDG FLAPYKVIRI
DIDRDLQGWR PSAGQVDKRG QLIEDRIYNQ NDMDRTLVLE KRTELVAKKI TEFLTATDPF
AKTIVFCDDI DHAERMRQAL VNLNPERVKE NRKYVMRITG DEQEGKAELD NFINPEERYP
VIATTSKLMT TGVDAQTCKL VVLDQHIKSM TEFKQMIGRG TRINEDYDKY WFTIMDFKKA
TELFADEAFD GPPIVIYEPG VDDPPVPPVE PPTPPGVEPP VPPEPPGFPP GPEGVRAKYF
VGDVEVQVIA ERVQYYGPEG KLITESLKDY TRKAVRKDYS TLDQFLKRWT SAERKAAVIK
ELEEHGLLLE ALAIEVNKDC DAFDLICHVA FDQPALTRRE RADQVKKRNY FTKYGEQARK
VLEALLEKYA DTGIENIDDI KILTLDPFSK MGTASELVSA FGGKPGYIAA LHELENQLYA
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