| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1110 |
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| Symbol | |
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| ID | 5052312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1154107 |
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| End bp | 1155909 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640471280 |
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| Product | NADH dehydrogenase (quinone) |
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| Protein accession | YP_001155890 |
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| Protein GI | 145589293 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit
[COG1905] NADH:ubiquinone oxidoreductase 24 kD subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCACC CAAAGCCTTC TGGAGAAGTC AAAGCAGTTG CCATAGCTAC TGCTGATGAT
TTGCGCGAAA CCATTCGTCG CAAAAGTAAG TTGAAGGGTC GTCAAGTGGA TGATGTTTCA
GTCGCTGAAG TTCGCCAGTT GATTGGTCAT GCCCCACATC GCCGTGATTT ATTAATTGAA
CATCTTCATA AGCTGAACGA TGAATATCGT GCGTTGCACG ATCGTCATTT AGTTGCTCTT
GCAAAAGAAA TGAATCTGCC GATGGCAGAG GTGTATGAAG TCGCCACTTT CTACCATCAC
TTTGAAGTGG TGCGTGGTAA TGATCCAGTG GCGGACATCA CTGTGCGTGT TTGTGATGGC
ATCGCTTGTG AGTTAGCTGG TGCGCAAAAT TTATTAAGCA AGCTACCTTC TATTTTAGGT
AATCCCAATA TCAAGGTTGC CGCTGCTCCG TGTGTAGGCC GTTGTGAGCA GGCTCCAGTT
GCTGTGGTGC ATCAGTACCC AGTTATTTTT GCTAGTGTTG ATAAAGTCGC CGCAGCAATC
AAGAATGTCA TGACCACTCA GCCTCTAGCC AAAGATGACG CTAGCTTTGA TCCTGCTGCT
TTAGCAGAGC AGGGCGTATC ACCTCAAGGT GAAGGGCAGT CAATATCACC CGATTATGTA
GGCTACGAAG CTTATCGCGC TAAAGGTGGA TATGCCTTAG CAAAGGAAAT CGCTGAAGGT
AAGCGTGATG CGGAAAGCAT TATTAAGGCC ATGGAGAGCT CAGGCTTGCG TGGTTTAGGT
GGTGCAGGAT TTCCGGCGGG GCGCAAATGG CGTATCGTAA AAGATCAGGT TGCGCCAAAG
CTCATGGCCG TCAATATTGA CGAGGGTGAG CCAGGCACAT TTAAAGATCG CACTTACTTA
GAGCGCGATC CGCATCGTTT TTTAGAAGGC TTATTGATCG CGGCTTCTGT AGTGGGTATT
GATGCTTGCT ATATTTATTT ACGCGATGAA TATCATGGTT GTCGTGAGTT ACTGCAGTTG
GAGATAGATA AGCTAAAGGC CAATCCCCCA TTTAAATTGC CTTTAATTGA ATTACGTCGT
GGTGCTGGTG CTTACATTTG CGGTGAAGAA TCCGCGATGA TTGAAAGTAT TGAAGGTAAG
CGTGGTGAAC CACGCATGCG TCCACCTTAC ATTGCACAAG TAGGATTATT TGGTAGGCCA
ACTCTTGAGC ATAACTTTGA AACCCTATAT TGGGTACGGG ATATTGTTCA GCGTGGACCA
GAATGGTTCA GTTCCTTTGG CCGTCATGAT CGCAAAGGTC TGCGTAGCTT TAGCGTCAGT
GGGCGCGTTA AAAAACCCGG CGTTAAATTG GCACCTGCAG GCATCACGAT TCAAGAGCTT
ATTGACGAGT ATTGCGGCGG TATGCAAGAA GGCCATCAGT TCTACGGATA TCTTCCTGGT
GGGGCATCAG GAGGGATCTT GCCTGCCACT ATGAATGACA TTCCTTTGGA CTTTGATACC
TTGCAACCTT ACGGATGCTT TATTGGTTCC GCAGCGGTAA TGGTGTTCAG TAACCAAGAT
AAAGCCCGTG ATATGGCTTT AAATGTGATG CATTTCTTTG AGCATGAGAG CTGTGGCCAA
TGTACCCCGT GTCGGGTAGG TACTGGTAAA GCTGCCAAAC TCATGCAAGC GAAATCTTGG
GATCAAACCA CCCTTGAAGA TTTAGCAACC GTGATGGTTG ATGCTTCTAT TTGCGGTTTA
GGTCAAGCAG CACCAAACCC CATTCGTTGC ATCCATAAAT ATTTCCCGAA CGAAGTTGCA
TAA
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| Protein sequence | MNHPKPSGEV KAVAIATADD LRETIRRKSK LKGRQVDDVS VAEVRQLIGH APHRRDLLIE
HLHKLNDEYR ALHDRHLVAL AKEMNLPMAE VYEVATFYHH FEVVRGNDPV ADITVRVCDG
IACELAGAQN LLSKLPSILG NPNIKVAAAP CVGRCEQAPV AVVHQYPVIF ASVDKVAAAI
KNVMTTQPLA KDDASFDPAA LAEQGVSPQG EGQSISPDYV GYEAYRAKGG YALAKEIAEG
KRDAESIIKA MESSGLRGLG GAGFPAGRKW RIVKDQVAPK LMAVNIDEGE PGTFKDRTYL
ERDPHRFLEG LLIAASVVGI DACYIYLRDE YHGCRELLQL EIDKLKANPP FKLPLIELRR
GAGAYICGEE SAMIESIEGK RGEPRMRPPY IAQVGLFGRP TLEHNFETLY WVRDIVQRGP
EWFSSFGRHD RKGLRSFSVS GRVKKPGVKL APAGITIQEL IDEYCGGMQE GHQFYGYLPG
GASGGILPAT MNDIPLDFDT LQPYGCFIGS AAVMVFSNQD KARDMALNVM HFFEHESCGQ
CTPCRVGTGK AAKLMQAKSW DQTTLEDLAT VMVDASICGL GQAAPNPIRC IHKYFPNEVA
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