| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1038 |
|---|
| Symbol | |
|---|
| ID | 5053976 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009379 |
|---|
| Strand | - |
|---|
| Start bp | 1041234 |
|---|
| End bp | 1042733 |
|---|
| Gene Length | 1500 bp |
|---|
| Protein Length | 499 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640471205 |
|---|
| Product | proton-translocating NADH-quinone oxidoreductase, chain N |
|---|
| Protein accession | YP_001155818 |
|---|
| Protein GI | 145589221 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1007] NADH:ubiquinone oxidoreductase subunit 2 (chain N) |
|---|
| TIGRFAM ID | [TIGR01770] proton-translocating NADH-quinone oxidoreductase, chain N |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGCAT TCGATCTATA CGCCGTCCTG CCAGAACTCG TTTTACTCAT AGCCACCTGC
TTACTATTGG TAGCTAGTGT CTATGTGCGC GAGAGGGTGA CATCAACCCC TGGTGTCGAG
CAAGATATTT TCCATACCCC GCGCGGCGTT GGGTTTGTCT ATTTCTTTTC GCTGATTTTG
TTGGCGTATC TGATTTTCGC TTTTCTAGGC CGCCTTGGCG ATGTCTCATT GGTTGCAATG
AATGGCTTAT TCCAATCTGA TCCACTTTCT AATTTGTTAA AAGCGTGTTC AAGTGGCGCC
GTATTAGTTA GCTTGATTTA TTCAAAGCAA TACTTGAAGG ACCGCGGACT GTTTCGCCCC
GATTTCATTG TGTTGGCTCT ATTGGCTTTA TTAGGTCAAT TTGTATTAAT TTCTGGCGCC
AATCTGTTGA CTCTTTACCT CGGCCTTGAG CTGATGGCTT TGCCTACCTA TGCATTGGTG
GCGATGCGTC ATAACAGCGA AAAAAGCGTT GAGGCAGCAA TTAAGTATTT CATCCTTGGT
GCTTTAGCTT CGGGCTTTCT CCTTTATGGC ATGTCTATGC TCTACGGCGT AACCGGCTCT
TTAGATTTGA TAGAAATCTT TAAAACGGTT GCTGATCCTC GTGTGAATCA TTTGGTGATG
GCTTTTGGCT TGGTATTTAT TGTGGCAGGT CTAGCTTTCA AATTAGGTGT AGTGCCATTC
CACATGTGGG TTCCTGATGT TTATCAAGGC GCCCCTACAG CTGTAACACT CATGATTGCG
GCGGCACCGA AGCTAGCTGC ATTTGCATTG TTGTTCCGCC TATTGGTAAA TACCTTGTTG
CCTCTTTTAG GTGATTGGCA ACCCATGTTG GTGTTGCTCG CCGTTCTGTC ATTGGTAGTT
GGTAACGTGA CTGCTATTGC GCAAACCAAT GTGAAACGTA TGCTTGCTTA CTCGGCAATT
GCTCAAATGG GCTTTGTTTT GCTAGGAATG CTTTCTGTTT TTGACGACCA TGCCTTTAGT
GCTGCTCTGT TTTATGTTGT TACCTATGTG TTAACTACTT TAGGTAGTTT CGGATTGCTG
ATGATCTTGT CTCGCAAAGG TTATGACTGC GAGACCTTAG ACGGTCTTAA GGGTTTGAAT
AAGAAACATC CTTGGTTTGC ATTTATTGGC CTGGTCATGA TGTTCTCTCT TGCAGGCATC
CCGCCAACAG TGGGTTTTGC AGGTAAGTTA GGTGTTTTGG AAGCTTTGGT TGATGCTGAG
CACACATTTT TAGCTGTGAT TGCTGTTTTA GCTTCTTTGA TCGGCGCTTT CTACTATCTC
AGGGTAGTTA AGGTAATGTA CTTTGATGAA CCTGCTCATG AAGTTACTGT TACCGGCTCT
TTATTTGCCA AGGGAATTTT AAGTTTGAAT GCTATCTTGG TTTTGGTGAT CGGTATAGTT
CCAGCTGGCC TGATGAGTAT TTGCCTTGAG GCTATGCGTA GAACTTTACT AGGTTCTTGA
|
|---|
| Protein sequence | MQAFDLYAVL PELVLLIATC LLLVASVYVR ERVTSTPGVE QDIFHTPRGV GFVYFFSLIL
LAYLIFAFLG RLGDVSLVAM NGLFQSDPLS NLLKACSSGA VLVSLIYSKQ YLKDRGLFRP
DFIVLALLAL LGQFVLISGA NLLTLYLGLE LMALPTYALV AMRHNSEKSV EAAIKYFILG
ALASGFLLYG MSMLYGVTGS LDLIEIFKTV ADPRVNHLVM AFGLVFIVAG LAFKLGVVPF
HMWVPDVYQG APTAVTLMIA AAPKLAAFAL LFRLLVNTLL PLLGDWQPML VLLAVLSLVV
GNVTAIAQTN VKRMLAYSAI AQMGFVLLGM LSVFDDHAFS AALFYVVTYV LTTLGSFGLL
MILSRKGYDC ETLDGLKGLN KKHPWFAFIG LVMMFSLAGI PPTVGFAGKL GVLEALVDAE
HTFLAVIAVL ASLIGAFYYL RVVKVMYFDE PAHEVTVTGS LFAKGILSLN AILVLVIGIV
PAGLMSICLE AMRRTLLGS
|
|---|
| |