Gene Pnuc_0983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0983 
Symbol 
ID5052392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp980231 
End bp981169 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content44% 
IMG OID640471148 
Productalpha/beta hydrolase fold 
Protein accessionYP_001155763 
Protein GI145589166 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAATCC AATTTTTAGG CTTCGAACAA AAACGAATAA CCGTACCTTC TGCAGATGGG 
CCAATTGAAA TTGCTTGCCA GATAGGTGGC TCAGGACCGG CACTTTTACT TTTGCATGGT
TTTCCTCAAA CAAAAGCAAT CTGGCATAAA GTAGGGCCAG CATTGGCCAA GAACTACACT
GTAGTTATCC CAGATTTACG TGGATATGGC GCATCTTCAA AGCCTAATGG AAAAGATGAT
CATTCAACTT ATTCCAAGCG TTCAATGGCT GCTGATCAGC ATGCTTTAAT GAAGGAATTA
GGTCATGAGC AATTCTTTTT ATTAGGGCAT GACCGAGGGG GTCGGGTATC ACATCGTTTA
GCAATGGATT TCCCTCAAAG CGTAAAACGC CTGATGGTTT TGGATATCTC TCCAACGCTA
GCAATGTATG AAAACACAAC CATGCAGTTT GCAAGGGGAT ACTGGCATTG GTTTTTTCTT
ATTCAGCCAG CACCAATTCC AGAGGCGATG ATTGCTGCAA ACCCGGAATT TTGGTTAAAA
AAACATATGG GTCGACATGC TGGTACTGGA ATCTTTAGCG CTGATCGATG GACTGAATAT
CTTTCTGCTG TCAGTGACCC TCAATGCATG CATGCCATGT GTGAAGATTA TCGGGCGGCC
GCATCCATCG ATTTAGTTCA TGACCGAGAA GATAGGGCAG AAGGCAAAAA ACTTGTGATG
CCACTACGAG TTCTATGGGG CGAGCATGGG CTAGTTGAGA AGTGTTTTAA GCCCATAGAT
GACTGGAGCA ATGCCAGTAA ATCTGAAGTA ACTGGAAAGG CCTTAGCCTG TGGCCATTAC
ATTCCTGAAG AACTTCCAGA TACCTTGATA GAGGAAGCGA GAACCTTCTT TTCACAAGGA
GTGGGCGGGG AAGTTGCTGT AAAAATTAAT AAAACCTAA
 
Protein sequence
MPIQFLGFEQ KRITVPSADG PIEIACQIGG SGPALLLLHG FPQTKAIWHK VGPALAKNYT 
VVIPDLRGYG ASSKPNGKDD HSTYSKRSMA ADQHALMKEL GHEQFFLLGH DRGGRVSHRL
AMDFPQSVKR LMVLDISPTL AMYENTTMQF ARGYWHWFFL IQPAPIPEAM IAANPEFWLK
KHMGRHAGTG IFSADRWTEY LSAVSDPQCM HAMCEDYRAA ASIDLVHDRE DRAEGKKLVM
PLRVLWGEHG LVEKCFKPID DWSNASKSEV TGKALACGHY IPEELPDTLI EEARTFFSQG
VGGEVAVKIN KT