Gene Pnuc_0976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0976 
Symbol 
ID5052233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp973746 
End bp974909 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content44% 
IMG OID640471141 
Productmajor facilitator transporter 
Protein accessionYP_001155756 
Protein GI145589159 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCCTT CGCTACGCTG GGCCTTCGGG TCCTTTTTCT TTTTATATTT TGCATATGTC 
GGCCTAGTTT CACCCTACGC GAGTTTATTT TTCCTTGATA GAGGATTTAG CGTTATTGAG 
ATTGCTGTTC TCATGTCGAT GCTACAGATT ACCCGCATTA TTGGACCCTT TAGTTGGGGC 
TGGCTCTCTG ATTATTTATC CAACCGCATT GGCATTATTC GAGTTTGCGC CTGTCTTGCA 
GCCTTAACTT TTTTATGCAT TTTTTTCCTG CATAGCTATA TCAGTTTCTT TATTTGGATG 
TTTGTACTTC ACACCATTCT TAGCAGTCAA ATGCCCTTGG GTGAAACTGC CACCATACAT 
GCTTTATATA AAGATAATTC ATTTGATAAG CGCTACGGAC GTTTGCGCTT ATGGGGCTCT 
ATCGGTTTTA TTGCGATGGT TCTTGTGGCT GGTGAATTAT TTCAACGTAA AGGAATTGAA 
GTCTATCCAG TTGTAGGTTG CGTTGTCTTG ATTGCCTTAG CACTAGTTAC TTTTTGCCTC 
CATGAGCCCA AAATGGAGCG ACGTAAGATG GTCAAGGGTG AGTTGCTTGT CGTTTTATTT 
AACCCAGATG TCCGATGGTT TTTGATCTCT GGGTTTTTCA TGATCTTCGC TCACGCTGCT 
CTTTATGTCT TTTACTCCCT CTATTTAGCC GACCTTGGCT ACAACAAATT TCAAATCGGG 
CTTTTCTGGG CTCTTGGAGT ATCTTCTGAA GTGCTGTTTT TTTATTACCA AAATAAACTT 
TTAAGCCGCC TGGATGCCGA GGTAATACTC CAGGGTGCCT TTGGGATAGG AGTAGTACGC 
TTTATTTTGA TTGCCTTCTT GCCAATAACA TCGGTTTTAA TTCTTGCGCA ACTCATGCAT 
GCCGCAACCT TTGCAGCCCA TCACAGTGCG GCGACTAAGT TATTGCAACG CTGGTTTACG 
GGACCGCTTC AAGCTCGGGG TCAAGCCATT ATGGCAACCG TTTCCTATGG TCTAGGTGGT 
ACGATTGGTG GCTTGTGCGC GGGATGGATC TGGGAGCTCT CACAGCCAAG AGATGTTTTT 
GTAATGTCTG CTTTCGCCTG TGGGATAGCG GGTATGGCCA TTCAAAAAAT GAGGCCACGC 
CGCTATCCAG CGCATAAAGA TTAA
 
Protein sequence
MTPSLRWAFG SFFFLYFAYV GLVSPYASLF FLDRGFSVIE IAVLMSMLQI TRIIGPFSWG 
WLSDYLSNRI GIIRVCACLA ALTFLCIFFL HSYISFFIWM FVLHTILSSQ MPLGETATIH 
ALYKDNSFDK RYGRLRLWGS IGFIAMVLVA GELFQRKGIE VYPVVGCVVL IALALVTFCL 
HEPKMERRKM VKGELLVVLF NPDVRWFLIS GFFMIFAHAA LYVFYSLYLA DLGYNKFQIG 
LFWALGVSSE VLFFYYQNKL LSRLDAEVIL QGAFGIGVVR FILIAFLPIT SVLILAQLMH 
AATFAAHHSA ATKLLQRWFT GPLQARGQAI MATVSYGLGG TIGGLCAGWI WELSQPRDVF 
VMSAFACGIA GMAIQKMRPR RYPAHKD