Gene Pnuc_0966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0966 
Symbol 
ID5052962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp965940 
End bp966584 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content42% 
IMG OID640471131 
ProductdTMP kinase 
Protein accessionYP_001155746 
Protein GI145589149 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0125] Thymidylate kinase 
TIGRFAM ID[TIGR00041] thymidylate kinase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAAGA CATCACTTTA TCCAGGATTT TTCATTAGCT TTGAAGGCAT CGATGGGGCA 
GGTAAAAGCA CCCATATTGA ATCATTTAAA AAGTTGATGC AGGAACGCTA TCCCGATCGC 
GAAGTGGTGA TGACACGAGA ACCTGGCGGA ACACCTTTAG GTGAGCAGCT TAGAAATCTC 
CTTTTAGACG CACCCATGAA TTTAGAAACT GAAGCGCTAT TAATGTTTGC AGCACGAAGA 
GAGCATATTG CGCAAATTAT TGAACCTGCA CTGCTAGCTG GAAAAATTGT CATTTCGGAT 
CGATTTACCG ATGCGAGTTT TGCTTATCAG GGTGGTGGCA GAGGGTTAAG TCTTGCTAAA 
TTAAATGATT TAGAGCAATG GGTACAAGGT CGTGCTGACG GCAAGCTACT TCAGCCAAAC 
TTAACCATAT TATTTGATCT TCCTGGTGAG ATTGCGCAAG CTCGCCGCTC TAAAGTCAGA 
ACCCCAGATA AATTTGAAAA ATTAGACCTG GTATTTTTTG AAAAAGTTCG CCAAGAATAC 
TTACGTCGCG CTCTTGAAGA TCCATCACGT TTTCATAAAG TAGATGCCAC TCAAACCCCA 
GAAGCAATCT GGAACGGTTT ACAAGCTTTA GAGATTAATT GGTAG
 
Protein sequence
MTKTSLYPGF FISFEGIDGA GKSTHIESFK KLMQERYPDR EVVMTREPGG TPLGEQLRNL 
LLDAPMNLET EALLMFAARR EHIAQIIEPA LLAGKIVISD RFTDASFAYQ GGGRGLSLAK 
LNDLEQWVQG RADGKLLQPN LTILFDLPGE IAQARRSKVR TPDKFEKLDL VFFEKVRQEY 
LRRALEDPSR FHKVDATQTP EAIWNGLQAL EINW