Gene Pnuc_0952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0952 
Symbol 
ID5052495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp955552 
End bp956427 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content43% 
IMG OID640471117 
Producthypothetical protein 
Protein accessionYP_001155732 
Protein GI145589135 
COG category[R] General function prediction only 
COG ID[COG1647] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.600635 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCTTG CAACGAATGA TGATTCTAGC CCTTTAATTG TACTATTTCA TGGGCTTTCC 
TCATCCCCGC TAGAGTTTAA TTTCCTTGGC TCACAACTAA TTGCTGCCGG ATATAGAGTG 
AATACTCCCA GCATTCAGGG GTATTCTTTC GGTGGAAACG CCACCAGCTG GAAAAGTTGG 
CTTAGCGAAG CTGTTTCACA TGTTCAGGGT TTACAGGCAA ACGAATCCAA GCCCATTACC 
TTGGGTGGCA TCTCATTAGG TTCAACCTTG GCCTTAGCTG TCGCATCCGA ACTAAACGAC 
ATCTTAGGCG TCCTTGCCCT ATCCACCACC CTCAAATATA ACGGCTGGGC AGTGCCATGG 
TATCGTGCCC TGATCCCAGC AGGAATGGTT TTGGGGCTTG GGGATCGCTA CAAATATATG 
GAAAAGGACC CTTTTGGCAT TAAAAACCCC CAAATTCGTG CATATATTAA GAGGGTTCTT 
ACAAGTCAAG ATGTGTCGGA TGTTGGCGGC TTATATATGT CTTTGAGACA TATGCATGAA 
GGTAATAAGC TATGTAAATA TGTAATAAAA AATTTAGCGA CAGTAAGTTC AGCCATTTTG 
ACTATTCACG CAGTAGATGA CGAAATTGCA AACGTACTTA ATGCGCAATT AGTGGCAGAG 
CGCACTAGCG CTACCATGGT ACGACAAATT TATCTCGGTG ATAGCTACCA TATGATTACC 
GTCGATAATG AACGCGAAAC AGTTGCTGCT GAAGTTCGTA GTTTCCTAGA TTCTATTTAT 
GGAAAATTTA AGCCAGAGCC CTATGAGGAT AAAATTTTGT CCCCTGAATT GCAACGTTTT 
TTGCGCAATA TCAAAAGAGG CAAGGAAAGC AAATAA
 
Protein sequence
MNLATNDDSS PLIVLFHGLS SSPLEFNFLG SQLIAAGYRV NTPSIQGYSF GGNATSWKSW 
LSEAVSHVQG LQANESKPIT LGGISLGSTL ALAVASELND ILGVLALSTT LKYNGWAVPW 
YRALIPAGMV LGLGDRYKYM EKDPFGIKNP QIRAYIKRVL TSQDVSDVGG LYMSLRHMHE 
GNKLCKYVIK NLATVSSAIL TIHAVDDEIA NVLNAQLVAE RTSATMVRQI YLGDSYHMIT 
VDNERETVAA EVRSFLDSIY GKFKPEPYED KILSPELQRF LRNIKRGKES K