Gene Pnuc_0951 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0951 
Symbol 
ID5052790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp954767 
End bp955501 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content42% 
IMG OID640471116 
Producthypothetical protein 
Protein accessionYP_001155731 
Protein GI145589134 
COG category[I] Lipid transport and metabolism 
COG ID[COG3000] Sterol desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACGTAC TTCTACCCTA TTTGGCTTCA CCCATCATAT TGATTGGTCT TAGCTACTGG 
GAAAGAAAAT ATCCGCTGTA TCCCTACGGC TCAGATAAGG GTTGGCATAA GAGATTATTT 
ATTTATGCCG CTCTTGGTCT ATTAGCTACA ACTTTAATAG GCCTAGCAAG CGAACCCTTT 
ACTGAAAAAT TAAACGCTCA TAGTGTAGTC GCACATTTTT TTTCAGAAAT GCCAAGCTGG 
CTCAATGGAT TTGTGGCCTA TTTTTTTATC TCATTTTTTG TCTACTGGTG GCATCGCTAC 
CGCCACCATA GCAATACGGC ATGGAAAGTC TTTCACCAAA TCCATCACAG CACATATCGA 
TTGCAGGCGG CCACCGCTTT TTATGCCCAC CCTTCTGATT TTGCGGCTAA TTTGACCATC 
ATCAACCTAG TGAGCTATGG TTTATTGGGT TTTAATATTG AATCAGCAGC ATGGGCCACT 
TTATGGGTAG CAGTTTTTGA GTACTGGGAG CACACCAATA TTCGAACGCC ACATTGGCTT 
GGATATTTCA TTGTTCGCCC AGAGATGCAT CGTATTCATC ATGAACGCAA TCGTCATAGC 
AACAATTACG GCCTTCCTCT TTGGGATATC CTCTTCGGAA CTTATGAAAA TTCGTCTAGG 
GTCGTAGAGT GTGGTTTTGA AATTGATGAA GAGGAGCGAG TTGTAGATAT GCTCGCTTGT 
AAACAAGTTC AATAA
 
Protein sequence
MNVLLPYLAS PIILIGLSYW ERKYPLYPYG SDKGWHKRLF IYAALGLLAT TLIGLASEPF 
TEKLNAHSVV AHFFSEMPSW LNGFVAYFFI SFFVYWWHRY RHHSNTAWKV FHQIHHSTYR 
LQAATAFYAH PSDFAANLTI INLVSYGLLG FNIESAAWAT LWVAVFEYWE HTNIRTPHWL 
GYFIVRPEMH RIHHERNRHS NNYGLPLWDI LFGTYENSSR VVECGFEIDE EERVVDMLAC 
KQVQ