| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0901 |
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| Symbol | |
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| ID | 5053027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 894877 |
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| End bp | 897258 |
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| Gene Length | 2382 bp |
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| Protein Length | 793 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640471061 |
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| Product | DNA topoisomerase IV subunit A |
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| Protein accession | YP_001155681 |
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| Protein GI | 145589084 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01062] DNA topoisomerase IV, A subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATTG TCGAGGTAGA TGAGCCACTT GCCCCTGCTA AAACACCAAA TGCAGGAGGA
CCTAAAGATC CGCATGATCC AAAAACCATC GACTTAAATG AAGATGGTAA GGATGGCTTA
ACCTTAGCAG TCTATGCAGA GCGTGCTTAT TTAGATTACG CCATTAGCGT TGTTAAAGGT
CGTGCATTGC CTGATGTCGC TGACGGTCAA AAGCCTGTGC AACGCCGTAT TTTGTTCTCA
ATGAGTGAGA TGGGTCTGCG AGCTGATGCC AAACCCGTTA AGAGCGCTCG TGTGGTTGGC
GATGTATTGG GTAAATTTCA TCCTCACGGT GACCAATCTG CCTACGACGC ATTGGTGCGT
TTAGCGCAAA GCTTTTCATT GCGTTACCCA CTAATTGATG GTCAGGGGAA CTTTGGCTCA
CGCGATGGTG ATGGTGCAGC TGCCATGCGT TATACCGAAG CGCGTTTAAC CAAGATTGCA
GGCTTACTTT TAAGTGAGAT TGATGAAGGT ACGGTAGATT TTGCGCCGAA CTATGATGGC
TCTTTTCAGG AGCCCAAATT ACTTCCTGCG CGCCTGCCTT TTGTATTGCT CAATGGCGCT
TCAGGTATTG CAGTTGGTAT GGCTACCGAG ATTCCTTCAC ACAATTTACG TGAAGTAGCC
TCTGCAGCAA TTGCGTTGAT GAAGTCTCCC AAAATGTCTA CTGCAGAACT GCTGGGAATC
ATGCCTGGCC CTGACTATCC AGGTGGCGGT CAGATCATTT CATCGCCAGC GGAAATTGCG
CAAATTTACG AAACAGGGCG TGGAAGTATC AAGGTTCGTG CTCGTTGGTC TGTCGAAGAA
TTGGCTCGCG GCCAATGGCA AATAGTAGTT AATGAATTAC CGCCATCAGC CTCCTCACAA
CGTGTATTGC AAGAGATTGA GGAAATCACC AATCCTAAAG TGAAGGTTGG TAAAAAAACC
CTCACACCAG AGCAAAATAA TTTGAAGTCG ACCATCCTAA ACGTGCTTGA TGGTGTGCGT
GATGAGTCAA GTAAAGATGC AGCTGTTCGT TTGGTCTTCG AGCCAAAGAG TAAAAACATT
GATGTCAATG AATTTGTAAA TCTATTGCTG GCGCATACCT CCTTAGAGTC CAATGCACCA
ATGAACTTGG TGATGATTGG TAATGATGGT CGTCCACGCC AAAAAGGCTT AAAAGAAATT
TTGAGCGAGT GGGTTGAGTT CAGGGTATCT ACAGTCACGC GCCGTACCCA ATATCGACTG
GGTAAAGTCA AAGATCGTAT GCATATATTG GAAGGGCGCT TAATTGTTCT TCTCAATATC
GATAAAGTCA TCAAGATTAT TCGTAACAGC GATGAGCCTA AATCCGATTT GATCAAAGAG
TTCAAACTCT CTGATCGTCA AGCGGAAGAT ATCTTAGATA TTCGTTTGCG TCAGTTAGCG
CGTCTCGAGG GAATTAAGAT TGAACAAGAA CTCAAGCAAC TGCAAACTGA ACGAGATGAT
TTAGAAGGCT TACTCCAAAG TGATGCTGTA CTGCGTAAAC GCATCATTAA AGAGATCGAG
TCAGATCTCA AAGATTTTGG TGATGATCGC CGTACCCTGA TTCAAGAAGA TAAGCGTGCT
GTTGCTGAAA CCAAAGTAAT CGATGAACCT GTAACGGTAA TCGTTTCCCA AAAAGGTTGG
GTACGGGTAC GTCAGGGCCA TGAGCACGAT GCTACGCAAT TTAGCTTTAA GGCGGGTGAT
GCTTTGTATG GCACCTTCGA GGTTCGTACT ATTGATGTTA TACAGGGCTT TGGCAGTGAT
GGCCGTGTAT ATACCGTTCA AGTTAGTGAA TTGCCAGGCG CGCGTGGTGA TGGTTCACCG
CTGACTAGCT TTGTAAACTT GGCTACTGGC TCTCAAATGG TGGCTTACTA TGCTGGACAG
CCTGATGACT TGGTCTTGCT CTCTACTAAA GCAGGCTATG GATTCTTGGC TAATGTTTCG
GATATGAGCA CGCGTAATAA GGCGGGTAAA TCCTTTATTA GTGTCGATAG TAAAGTGCCT
GGTGATGCAC CATTGGGTGC TGCTAAAGTG AAGGTAGGCA TGAAGCAAGT AGCCTGCCTA
TCGGAAGCTT CTAAGTTGTT GGTATTCTCC TTGGATGAAT TAAAGCGTTT ACCTACTGGT
GGCAAAGGCG TCATTCTGAT GGGTCTAGAT GACAAGGAGT TTTTAGCGTC AGCAATTGCC
GTCGGGTCTG ATGGCGCTAC TTATTCTGGA GCAGGACGTG CAGGCAAGCC TACTGAACTG
AGTCTTGATG CCAAAACACT GAAATCTTTT GCTGGCAATC GCGCTCGCAA AGGACACTTT
GTAGAGCCTC GCTTGAAAGA CGGAAAGCTT AAAGCTAGCT AA
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| Protein sequence | MDIVEVDEPL APAKTPNAGG PKDPHDPKTI DLNEDGKDGL TLAVYAERAY LDYAISVVKG
RALPDVADGQ KPVQRRILFS MSEMGLRADA KPVKSARVVG DVLGKFHPHG DQSAYDALVR
LAQSFSLRYP LIDGQGNFGS RDGDGAAAMR YTEARLTKIA GLLLSEIDEG TVDFAPNYDG
SFQEPKLLPA RLPFVLLNGA SGIAVGMATE IPSHNLREVA SAAIALMKSP KMSTAELLGI
MPGPDYPGGG QIISSPAEIA QIYETGRGSI KVRARWSVEE LARGQWQIVV NELPPSASSQ
RVLQEIEEIT NPKVKVGKKT LTPEQNNLKS TILNVLDGVR DESSKDAAVR LVFEPKSKNI
DVNEFVNLLL AHTSLESNAP MNLVMIGNDG RPRQKGLKEI LSEWVEFRVS TVTRRTQYRL
GKVKDRMHIL EGRLIVLLNI DKVIKIIRNS DEPKSDLIKE FKLSDRQAED ILDIRLRQLA
RLEGIKIEQE LKQLQTERDD LEGLLQSDAV LRKRIIKEIE SDLKDFGDDR RTLIQEDKRA
VAETKVIDEP VTVIVSQKGW VRVRQGHEHD ATQFSFKAGD ALYGTFEVRT IDVIQGFGSD
GRVYTVQVSE LPGARGDGSP LTSFVNLATG SQMVAYYAGQ PDDLVLLSTK AGYGFLANVS
DMSTRNKAGK SFISVDSKVP GDAPLGAAKV KVGMKQVACL SEASKLLVFS LDELKRLPTG
GKGVILMGLD DKEFLASAIA VGSDGATYSG AGRAGKPTEL SLDAKTLKSF AGNRARKGHF
VEPRLKDGKL KAS
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