| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0869 |
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| Symbol | |
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| ID | 5053299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 862918 |
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| End bp | 863976 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640471027 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001155649 |
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| Protein GI | 145589052 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTGGTTT GCCTCAAATC ATGCGGTAAA GGCGTTACTC GTGTCCCCAT ACCGGTTACT
ACGGCATTAC CCCTTTCACA AGAAATACGC AGTTTTGCTA CCTTCGATGG GGTTGTTGAT
CCTTATCTCA CCGTTAATTT GGATGCGCGC GTAAAGGGCT ATCTCACCAA AATTGGGTTT
GTAGATGGCT CTATGGTGAA AAAAGATGAT TTGTTGTTTG TTATTGAGCA AGAGCCTTAT
ATACAAGAAG TTAAGCTTAA AAAAGCTATC TATGACGAAG CCAAAATTGA ATACGGACGT
CAAAAATCCT TGCTAAAAGA AAATGCAACA TCTCAGGCGG CTGTTGATAA AGCTTTATCT
CAGTATCAGC AGGCGGAGGC TAACTTAACC CTTGCTAAGA TTAATTTAGG CTATACCGAA
ATTAGAGCTC CATTTGATGG ACTAATGGGT AGACATTTAT TGGATGTAGG TACATACCTA
GACACTTCTA CAAAAGGTGT ACAGCTAGCA ACCATCCAGC AGATTTCTCC CATATATGTG
TATTTCTCAA TCAATGAGCG AGAGTTCTTA AAGTTTCAGA AGGGCTTGGA GAACAAAGAA
GAATATAAGG CTGAGGTGAA TACCTTGCCG CTCTTTGTTG GTCTACAGAG TGAAAAAGGC
TACCCACATG AAGGTATCTT AGACTACGCG GCAAATTTAA TCTCTACAGA AACCGGCTCC
TTGCAATTGC GTGGAATCTT TAAGAATGCT GACTATCAAT TAATACCTGG GCTGTATGCA
CGTGTAATGG CCCAGTATGG CGAACCAAGA CAGGCTTTAT TGGTGCCCAA TACCGCCGTG
ATGAATGATC AAGTTGGGAA CTATGTCTTT ATTTTGGATG AGGCTAAGCG GGCTCAACGC
CAGGATATTT CCCTGGGACA GCGTTTTGAA AAGTACGTTG AGGTAACGAA GGGTTTGTCA
GCGACCAGCC AAGTGGTGAT TAACGGATTC ATTAACTTAA GCGTTAATCA AGAAGCCAAT
CCGAAACAAG TAACCCTTGA AGCGATGATT CTTAAATAA
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| Protein sequence | MVVCLKSCGK GVTRVPIPVT TALPLSQEIR SFATFDGVVD PYLTVNLDAR VKGYLTKIGF
VDGSMVKKDD LLFVIEQEPY IQEVKLKKAI YDEAKIEYGR QKSLLKENAT SQAAVDKALS
QYQQAEANLT LAKINLGYTE IRAPFDGLMG RHLLDVGTYL DTSTKGVQLA TIQQISPIYV
YFSINEREFL KFQKGLENKE EYKAEVNTLP LFVGLQSEKG YPHEGILDYA ANLISTETGS
LQLRGIFKNA DYQLIPGLYA RVMAQYGEPR QALLVPNTAV MNDQVGNYVF ILDEAKRAQR
QDISLGQRFE KYVEVTKGLS ATSQVVINGF INLSVNQEAN PKQVTLEAMI LK
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