Gene Pnuc_0789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0789 
Symbol 
ID5053394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp787514 
End bp788083 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content43% 
IMG OID640470946 
Productrhodanese domain-containing protein 
Protein accessionYP_001155571 
Protein GI145588974 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.259144 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAATCA TTATTTCAGG CCTTCTATTG GGCGGTGCTT TTGGTTTTGT ACTGGAGCGC 
GCAGGGTTTG GTAATCCAAA TAAGTTGACA GCTCAGTTTC GATTAACTGA CTGGTCAGTT 
TTTAAAGTGA TGTTCACGGC GATTGTTGTT GCAGCCGTTG GCTTAATGAT TTTTGAAAAG 
CTAGGCATTG TTGCAGTGGA TGAGTTGTTT GTACCACCAG CATTCTTGGG GGCCGCAGCG 
CTAGGTGGTG CCTTAGTAGG GGCGGGATTT GCTATAGGTG GATATTGCCC AGGTACATCA 
GTAGTTGGAA TGATGTCTGG ACGCATTGAT GCAGCAATTT TCTTAATTGG CTTGCTATTT 
GGTACGGTCA TATTTTCTGG AATATATCCA AGCATCGAAG CTTTAACGAC TCTGGGTGAG 
TTTTCTAAGG CCGATGCTTT GCCAGCAGCT TTGAATGTTT CAAGTCTCTC TATAGATGTG 
GTGATGGTAT TAGCAGCAGT TGGTGTTTTC TTATTTGGGT CATGGATGGA GAAAAAATCT 
ATAGGTCCAG TGAGCTCTAA ATTAAATTAA
 
Protein sequence
MEIIISGLLL GGAFGFVLER AGFGNPNKLT AQFRLTDWSV FKVMFTAIVV AAVGLMIFEK 
LGIVAVDELF VPPAFLGAAA LGGALVGAGF AIGGYCPGTS VVGMMSGRID AAIFLIGLLF 
GTVIFSGIYP SIEALTTLGE FSKADALPAA LNVSSLSIDV VMVLAAVGVF LFGSWMEKKS 
IGPVSSKLN