| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0626 |
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| Symbol | |
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| ID | 5052673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 615242 |
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| End bp | 616150 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640470780 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001155408 |
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| Protein GI | 145588811 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000742904 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTGAATG ACGAGGTCTC TCTAAGAAAG CTAGAAATTC TCTGCTCTTT TGTGAGAACA
GGGAGTCTTG TGAAAACTGC CGAAGAGTTT CAGCTTAGCT CAGTGAGCAT TCATAAGGCC
TTGCATTCCT TGGAGACTGG AATAGGTTGC CCCTTATTCG TCAAAGAAGG GCGTCAGTTA
AAGCCTTTGC ATGCAGCCTT GTATTTAGCT GAGGCCAGTG TAGATTTATT GGATGACGTT
GAGCGAGTTT TAAAAAAGAC CCGAGCAAAA GCTGGGGTAG AGAGCGGGCA GATACGTCTG
GGCTCTATGT ATTCTCTAAC GGCTAATATT ATTCCCCGCC TCATTATGGG CACCAAAATT
CGTCGACCAG ATTTGGATAT TGATTTGTAC TTGGGATCTA ACGAAGATCT CATGAAAAAA
CTCTCGGAAG GTCAGATCGA TGCAGTAGTC ATTGCAACAC CTTCAGGTAA ATTGCCGGAG
GATATACAGG TGGTCCCGCT ATTTGAGGAT CAGCTATTTT TTGCATCCTC TAAGAGTAGC
AAGCCACTAT CTGGTGCAAT TGATTTATTA GACTATCGCG ATGAAAAGTT TGTCACCTTG
CAAGATGGCT TTGCAACCAC TTCTGGTTTT GATGATGCAT TTGCATTGGC AGGATTTAAG
CCCAATGTAG TGATGAAGGT CGGCGACATC TTTTCCCTCA TGAATATGGT CTCCGGAGAT
ATGGGGAGAT CGCTTCTTCC TGGGCGCGTA AGGTCCTTGA TGGGTGATGC GATCGACTTT
ATCCCTCTTG CCCCCAAATA TCAGGTAGTT CAACGAATAG CCCTCATGTA CCTTCAGGCT
AATGAATCTA ACCCCAATAT CTTGGCCCTA GCAGCTGAAG GCCGCATGTT GCATCGCAAT
AATAAATAG
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| Protein sequence | MLNDEVSLRK LEILCSFVRT GSLVKTAEEF QLSSVSIHKA LHSLETGIGC PLFVKEGRQL
KPLHAALYLA EASVDLLDDV ERVLKKTRAK AGVESGQIRL GSMYSLTANI IPRLIMGTKI
RRPDLDIDLY LGSNEDLMKK LSEGQIDAVV IATPSGKLPE DIQVVPLFED QLFFASSKSS
KPLSGAIDLL DYRDEKFVTL QDGFATTSGF DDAFALAGFK PNVVMKVGDI FSLMNMVSGD
MGRSLLPGRV RSLMGDAIDF IPLAPKYQVV QRIALMYLQA NESNPNILAL AAEGRMLHRN
NK
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