| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0611 |
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| Symbol | |
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| ID | 5053238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 601068 |
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| End bp | 602531 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640470764 |
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| Product | ribonuclease |
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| Protein accession | YP_001155393 |
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| Protein GI | 145588796 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGAAG AAATTCTCAT CAACATCACG CCGCAAGAGA CGCGTGTTGC CTTAATTCAG
CAAGGTGCTG TGCAAGAGCT CCAGATCGAG AGAACTCGGC AGCGCGGTAT CGTTGGCAAT
ATTTATTTAG CTAAAGTAGT GCGCGTTTTA CCTGGCATGC AATCCGCCTT TATTGAGGTT
GGACTGGAAC GAACCGCCTT CATGCATGTA GCAGACATCA CTCAAAGTAA TCCACAACCT
CAAATTGAGA AGTTACTATT TGAAGGTCAA TCACTTTTAG TGCAAGTTCT CAAAGATCCA
TTAGGAACTA AAGGCGCACG TCTTACTACC CAACTAAGCA TTGCCGGCCG TAACTTAGTG
TATTTACCTC CTGCCGGTAC CGATGTCGCA ACTGAAAAAT ATATTGGCGT TTCTCAACGG
ATAGATAAAC CTGAGGAGCG CGAAGCAATT AAAGCGCGCC TTGCTAGCCT CATGGCGGAA
GATGAAAAAG GCGGAATCAT TGTGCGCACT AGCGCTCAAG ATGCCTCCGA CACTGAGCTT
CAGCATGATA TGCATTACTT AAGAACTACC TGGGAAAATA TTCGGGATGC CATGAAAAGC
AAAGCTGCCC CAAGCTTGCT CTACCAAGAT CTCAGTTTGG CAGAACGTGT TTTGCGTGAT
GTTGCAGGAG AAGACACCAG CCAAATTCGG GTGGACTCGG CCGAGAACTT TGAAAAACTC
AAAGGTTTTG CCAATCTATA CATGCCCAAT CTATTGAGCA AACTCACCTT GCATCGGGGC
GAGCGTGCCC TATTTGATCT CTTTGATGTT GACGCGGAGA TTAATAAGGC CTTAGGTAGA
CGCGTAGACC TCAAGTCTGG CGGCTATCTC ATGATCGATC AAACCGAATC GATGACCACC
ATTGATGTCA ACACTGGTAG TTACGTTGGC GCTAGAAATC TAGATGACAC TGTTTTTAAA
ACCAATCTAG AGGCAGCTCA AGCGATTGCC CGCCAATTGC GTTTACGAAA CCTTGGCGGC
ATCATCATTA TCGATTTCAT CGACATGATT GGTAGAGACC ATCAGGAATC GGTTTTATAT
GAATTGAAGC GTAATCTTGA GCGCGATCAT GCCCGTACCT CAGTCAGCGA ATTTTCTGCG
CTAGGCTTGG TGGAGATGAC GCGCAAAAGA ACCAGGGAAT CATTAGCCCA TATCACCTGC
GAGCCCTGTG CTACTTGCCA AGGAAAGGGT GAAATCAAAA CTGCCCAAAC CATCTGCTAT
GAAATCTTGC GTGAAATTGT GCGCGAGCAT CGTCAATTTA ATCCACGCGA ATTCAGAATT
GTGGCTGCGC CTGATGTGAT TGATCTTTTT CTAGAAGAAG AAAATCAATT TTTAGCTCAG
CTGGGTGATT TCATTGGCAA GCCCATCACC TTGCAAGCGG AAGGCAGTTT CCGCCAAGAA
CAATACGATA TTGTTTTAAG CTAA
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| Protein sequence | MNEEILINIT PQETRVALIQ QGAVQELQIE RTRQRGIVGN IYLAKVVRVL PGMQSAFIEV
GLERTAFMHV ADITQSNPQP QIEKLLFEGQ SLLVQVLKDP LGTKGARLTT QLSIAGRNLV
YLPPAGTDVA TEKYIGVSQR IDKPEEREAI KARLASLMAE DEKGGIIVRT SAQDASDTEL
QHDMHYLRTT WENIRDAMKS KAAPSLLYQD LSLAERVLRD VAGEDTSQIR VDSAENFEKL
KGFANLYMPN LLSKLTLHRG ERALFDLFDV DAEINKALGR RVDLKSGGYL MIDQTESMTT
IDVNTGSYVG ARNLDDTVFK TNLEAAQAIA RQLRLRNLGG IIIIDFIDMI GRDHQESVLY
ELKRNLERDH ARTSVSEFSA LGLVEMTRKR TRESLAHITC EPCATCQGKG EIKTAQTICY
EILREIVREH RQFNPREFRI VAAPDVIDLF LEEENQFLAQ LGDFIGKPIT LQAEGSFRQE
QYDIVLS
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