Gene Pnuc_0603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0603 
Symbol 
ID5052260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp590124 
End bp590531 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content46% 
IMG OID640470756 
Producthypothetical protein 
Protein accessionYP_001155385 
Protein GI145588788 
COG category[R] General function prediction only 
COG ID[COG3193] Uncharacterized protein, possibly involved in utilization of glycolate and propanediol 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGGCTA CTAAACCATA CTTAACTCAA GCGGACGCTC AAAAGATTTT GGATGCAGCA 
AATAAATATG CTGCTGAAAA AAATTGGGCA GTGACTATTG CTGTTTGTGA TGATGGTGGC
CACGTATTGG GTTTAATTCG TCGTGATGGT TGTGCTCCAG TGTCAGCTTA CATTGCTCAA
GAAAAAGCGC GCACTGCTGC AATGGGTAAA CGCGAAAGCC GTGTTTACGA AGAAATTATT
AATAACGGAC GTACATCCTT TTTATCCGTG CCACATATTT CAGGCATGTT AGAGGGTGGA
GTCAATATCG AGGTAAATGG GTTTACCATC GGCGCAGTCG GCGTTTCCGG CGTTAAATCG
ACCGAAGATG CTGAGACCGC TAAGGCCGGC ATTGCGGCCA TTCTGTAA
 
Protein sequence
MLATKPYLTQ ADAQKILDAA NKYAAEKNWA VTIAVCDDGG HVLGLIRRDG CAPVSAYIAQ 
EKARTAAMGK RESRVYEEII NNGRTSFLSV PHISGMLEGG VNIEVNGFTI GAVGVSGVKS
TEDAETAKAG IAAIL