Gene Pnuc_0556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0556 
Symbol 
ID5053971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp547934 
End bp548371 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content43% 
IMG OID640470710 
ProductDoxX family protein 
Protein accessionYP_001155340 
Protein GI145588743 
COG category[S] Function unknown 
COG ID[COG2259] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAACT ATACCGCCTC ATCCGATCTG ATCCTCTTAA TAGCACGCTG CTTGGTTTCG 
CCCATTATGC TGGTCTACGG ATTATCTAAA TTATTGGACA TTAGGGATGA TTTTGAAGAT 
AACCCCGCCA CACAGCGATT CATGAAGGTA TTTGATCATG GCGCAACACC CCCTTTATGG 
TTTGCTTATG CCAATGCCTT ATTTCAATTT GGTATGGGAC TAGCTATATT GTTGGGCTTT 
GAGACACGGA TTGCAGCTGC CTTAGTGGCG CTCTGGCTGA TTCCAGTAAC GTATTTTGGG 
CATCCTTTTT GGGCGGGAAT TGATCCCGCT GTGAATAAAG AAAACTTTAT TAAGAATCTG 
GGGATCATCG CTGCGTATCT CATGCTTTTC TGTTTTGGTG CTGGAAAATA TTCATTAGAT 
GCAGTACTTT TTGGTTAA
 
Protein sequence
MENYTASSDL ILLIARCLVS PIMLVYGLSK LLDIRDDFED NPATQRFMKV FDHGATPPLW 
FAYANALFQF GMGLAILLGF ETRIAAALVA LWLIPVTYFG HPFWAGIDPA VNKENFIKNL 
GIIAAYLMLF CFGAGKYSLD AVLFG