Gene Pnuc_0545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0545 
Symbol 
ID5053073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp536303 
End bp537730 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content44% 
IMG OID640470699 
Productputative cytochrome c1 signal peptide protein 
Protein accessionYP_001155329 
Protein GI145588732 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAT TCCTCTTCAC CTTCCTGATT GGTTTCATTC TTCTCTGCCT TAATTTAGGC 
TCAGCGCAAG CGCTCCCATT ATTTTCTCGA CAAACCGGTC AAAACTGTGT GGCTTGTCAT 
GCTGGTGGCC AGTACCCAGA GCTCACTCCA TATGGCCGGT ATTTTAAATT AACTGGTTAT 
ACGATTGGAG AGCGAACCAC CATACCTGTA TCAGTACAGT TTGTTGGTGG TGCTGCAACG 
AGTACCAATG GAAACAACGG CACTGGACAA GTCCATCAAA GTGGTAAGTT AGAACCTAAC 
TACCTTTTCT TGGATGTCGG CGGAAAGATC TTTGATAACT TTGGTGCATT TAGTCAATGG 
TATTACGCTT CAGATGAGCA AGTCAGCGGC AAAGGAAGTG TTCCAAACCA AAATAGTTTT 
GCAGCGGATG TACAAGACTG GCGTTACGCA GATCATTACG TAGGCAATAG TGCGGACCCT 
GTAAAAGATA TTATCTGGGG CGCTTCATTA AATAATTATG CTGGTGTCAC CGATGTGTGG 
AATTCATCGC CAATGTGGAT GTATCCCTAT ATGGGATCAA CCAGAAACTC CTCTACTTAT 
GGATTGCCTT TTAGTACCAG GTTGTCAGCG TACTCAATTC ATAACCCGGG GTATGGTGTA 
TACGCATATA TCAATAAAAA CTTTTATGCT GAGGCTGATC TCTATCAGTC GGGTGGTTCA 
GGAGCATTCT CATGGCTGAC TTACCCCGCA TCCAATAGCA ATCCCAATAA TTCCCCGGTC 
TATTTGCAGG GCGTTAATCC CTATGTACGC CTTGCTTATC AAAGTGATGA GCATGCAGGA 
CATAACTGGA TGATTGGTCT TTTGGGTGCC AATATTAACC AATACTCTAG CTGTAACACA 
GTATCTGCTA GCGCTTCTTA TAGAGGTGCT GCACTCACCT GCAATGGCCC AGTTAATTCT 
CCCGCTTTAA GCGCGGGCAC CGTTAAATTT CAGGATAGAG CAATTGATGG TCAATACCAA 
TATTTAGTTG ATCCACATAC AGTAACCGCA CAAGCTCGCT ATACCAAGGA AAATATCTCT 
GATCCTACTG GTATTTTGTA TAGCAACCCG AATAACACAA CAAACTCATT TATGTCGAAG 
GTAAGTTATG TTTATGACGC TACCTATGGT GCCGCTGTAG CATTTCAAAA CATTACTGGA 
ACGTCGGATA CGTATTACGG TACCAATGCA GTATCCGGAG CCGCTTTAAA CCCAAACTCG 
ACAGCTTGGA TACCTTCCAT CTGGTATCAG CCATTACAAA ATTTGCGCCT GACATATCAA 
TACACTGCAT TTACTAAATT CAATGGCGGA ACCATCAACT ATAACGGCCT GGGTACTAAT 
GCGAGTGCGA ATAATGCCAG CTGGCTTTAT TTATGGCTGG CAATGTGA
 
Protein sequence
MKKFLFTFLI GFILLCLNLG SAQALPLFSR QTGQNCVACH AGGQYPELTP YGRYFKLTGY 
TIGERTTIPV SVQFVGGAAT STNGNNGTGQ VHQSGKLEPN YLFLDVGGKI FDNFGAFSQW 
YYASDEQVSG KGSVPNQNSF AADVQDWRYA DHYVGNSADP VKDIIWGASL NNYAGVTDVW 
NSSPMWMYPY MGSTRNSSTY GLPFSTRLSA YSIHNPGYGV YAYINKNFYA EADLYQSGGS 
GAFSWLTYPA SNSNPNNSPV YLQGVNPYVR LAYQSDEHAG HNWMIGLLGA NINQYSSCNT 
VSASASYRGA ALTCNGPVNS PALSAGTVKF QDRAIDGQYQ YLVDPHTVTA QARYTKENIS 
DPTGILYSNP NNTTNSFMSK VSYVYDATYG AAVAFQNITG TSDTYYGTNA VSGAALNPNS 
TAWIPSIWYQ PLQNLRLTYQ YTAFTKFNGG TINYNGLGTN ASANNASWLY LWLAM