| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0490 |
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| Symbol | |
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| ID | 5052017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 480665 |
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| End bp | 481339 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640470644 |
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| Product | phosphoglycolate phosphatase |
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| Protein accession | YP_001155274 |
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| Protein GI | 145588677 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000155705 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCAAA GCCCCTATCA CGGGATCTTT TTTGATCTTG ATGGCACTTT AGCTGACACA
GCTCCAGATC TTGTAGCAGC GACCAATCAA TTGCTCATAG CTCGCAATCT GGCGCCCAAG
CCTTATGAAT TTTTGCGACC ATATGCATCT GCTGGCGCTC GAGGTTTGCT TGAAGGCGCC
TTTGGCATTA GCACTGACCA CCCTGACTTT GCAGTCTTAC GCGATGAGTT TTTTGCCAAT
TACGAGAATG CATTGCATGT AGAAAGTAAA TTATTTGAGG ACATGGATAG CTTGCTTGAT
CAAATGGATC AAGCCAATCT TCCCTGGGGA ATTGTGACTA ATAAGAGCGA GCGTTTTACC
AACCCCCTGG TAGAGCTCAT GGGTCTGCAC AAAAGATCTG TATCCACTGT ATCGGGCGAT
ACCACCGCTC ATGCAAAACC CCATCCCGAA CCCATCCTGC ATGCCGCACG ACTCGCCAAT
GTCGACCCAA GCAAATCTCT TTATATCGGC GACGATATTA GGGACGTTGT AGCAGGCAAG
GCGGCAGGAA TGAAGACCGT GGCTGCGGCT TATGGCTACT GTGGCTGTAA AGAGCCTCCT
GAGGCCTGGG GAGCTGACTA TATCGTCAAC AGCCCTCTTG AATTACTGCA AATCATCTTT
CCCAACAAGG TTTAA
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| Protein sequence | MKQSPYHGIF FDLDGTLADT APDLVAATNQ LLIARNLAPK PYEFLRPYAS AGARGLLEGA
FGISTDHPDF AVLRDEFFAN YENALHVESK LFEDMDSLLD QMDQANLPWG IVTNKSERFT
NPLVELMGLH KRSVSTVSGD TTAHAKPHPE PILHAARLAN VDPSKSLYIG DDIRDVVAGK
AAGMKTVAAA YGYCGCKEPP EAWGADYIVN SPLELLQIIF PNKV
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